RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1200128", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1200128 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28335840 28335840 PRJNA1200128_S_NODE_30466_length_178_cov_1.044444_g30357_i0 PRJNA1200128 30466 178 1.044444 1.85911032 Blastocladiella britannica 64508 Fungi Fungi 47.4 3.49e-4   NR KAI9218361.1 64508 g30357 i0 45.3 6.28651685393258 64 29 97.8 1 3 176 309 372 KAI9218361.1 hypothetical protein BC828DRAFT_332735, partial [Blastocladiella britannica] diamond 1119 47.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30565037 30565037 PRJNA1200128_S_NODE_13113_length_232_cov_1.243386_g13004_i0 PRJNA1200128 13113 232 1.243386 2.88465552 Blastocladiales 4805 Fungi Fungi 72.8 7.83e-13   NR ORZ36353.1 765915 g13004 i0 100 40.5129310344828 36 0 46.6 0 123 230 264 299 ORZ36353.1 citrate synthase-like protein [Catenaria anguillulae PL171] diamond 9399 72.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;