RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1200128", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1200128 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19453078 19453078 PRJNA1200128_S_NODE_15756_length_219_cov_1.335227_g15647_i0 PRJNA1200128 15756 219 1.335227 2.92414713 Acropora millepora 45264 Cnidaria other_Eukaryota 52.8 0.019   NTclustered gi|2113680164|ref|XM_029342383.2| 45264 g15647 i0 100 0.127853881278539 28 0 13 0 21 48 540 567 PREDICTED: Acropora millepora 52 kDa repressor of the inhibitor of the protein kinase-like (LOC114963241), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
23279250 23279250 PRJNA1200128_S_NODE_44879_length_155_cov_2.937500_g44770_i0 PRJNA1200128 44879 155 2.9375 4.553125 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.013   NTclustered gi|2918369551|emb|OZ237723.1| 317547 g44770 i0 100 0.180645161290323 28 0 18 0 102 129 14872283 14872256 Eunicella cavolini genome assembly, chromosome: 7 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
28272531 28272531 PRJNA1200128_S_NODE_45046_length_155_cov_1.803571_g44937_i0 PRJNA1200128 45046 155 1.803571 2.79553505 Paramuricea clavata 317549 Cnidaria other_Eukaryota 72 5.26e-13   NR CAB4013625.1 317549 g44937 i0 66.7 4.93548387096774 51 17 98.7 0 1 153 486 536 CAB4013625.1 Hypothetical predicted protein [Paramuricea clavata] diamond 765 72 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
32317528 32317528 PRJNA1200128_S_NODE_19419_length_205_cov_3.191358_g19310_i0 PRJNA1200128 19419 205 3.191358 6.5422839 Paramuricea clavata 317549 Cnidaria other_Eukaryota 48.1 2.78e-4   NR CAB3979078.1 317549 g19310 i0 46.2 7.34634146341463 52 28 76.1 0 203 48 707 758 CAB3979078.1 Hypothetical predicted protein [Paramuricea clavata] diamond 1506 48.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;