RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1199893" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1199893 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2877615 2877615 PRJNA1199893_P_NODE_15823_length_246_cov_0.890173_g15748_i0 PRJNA1199893 15823 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 370 5.399999999999999e-98   NTclustered gi|290982515|ref|XM_002673930.1| 5762 g15748 i0 93.878 0.995934959349594 245 15 99 0 2 246 2683 2439 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_70914), partial mRNA blastn 245 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9254524 9254524 PRJNA1199893_P_NODE_10148_length_299_cov_2.477876_g10073_i0 PRJNA1199893 10148 299 2.477876 7.40884924 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 246 1.19e-60   NTclustered gi|290984888|ref|XM_002675113.1| 5762 g10073 i0 95.484 0.903010033444816 155 6 87 1 3 156 1076 1230 Naegleria gruberi coronin (NAEGRDRAFT_56244), mRNA blastn 270 246 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11805167 11805167 PRJNA1199893_P_NODE_11110_length_287_cov_1.317757_g11035_i0 PRJNA1199893 11110 287 1.317757 3.78196259 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 475 1.3299999999999996e-129   NTclustered gi|290985314|ref|XM_002675325.1| 5762 g11035 i0 96.528 1.00348432055749 288 9 100 1 1 287 1092 805 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80333), mRNA blastn 288 475 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11805462 11805462 PRJNA1199893_P_NODE_6590_length_375_cov_0.973510_g6516_i0 PRJNA1199893 6590 375 0.97351 3.6506625 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 494 4.93e-135   NTclustered gi|290994000|ref|XM_002679575.1| 5762 g6516 i0 90.617 0.994666666666667 373 33 99 2 4 375 386 15 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_65315), partial mRNA blastn 373 494 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19452788 19452788 PRJNA1199893_P_NODE_15676_length_246_cov_1.560694_g15601_i0 PRJNA1199893 15676 246 1.560694 3.83930724 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 427 3.16e-115   NTclustered gi|290989207|ref|XM_002677187.1| 5762 g15601 i0 97.967 5.35772357723577 246 5 100 0 1 246 302 57 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56165), mRNA blastn 1318 427 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30988967 30988967 PRJNA1199893_P_NODE_14534_length_250_cov_0.870056_g14459_i0 PRJNA1199893 14534 250 0.870056 2.17514 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 140 2.939999999999999e-38   NR XP_044559483.1 5763 g14459 i0 86.1 0.948 79 11 94.8 0 238 2 1 79 XP_044559483.1 uncharacterized protein FDP41_006244 [Naegleria fowleri] diamond 237 140 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;