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contig_metadata

23 rows where bioproject = "PRJNA1199330", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Myxococcota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1199330 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
325122 325122 PRJNA1199330_P_NODE_124081_length_212_cov_4.345324_g123382_i0 PRJNA1199330 124081 212 4.345324 9.21208688 Anaeromyxobacter oryzae 2918170 Bacteria Bacteria 165 2.29e-36   NTclustered gi|2199265233|dbj|AP025591.1| 2918170 g123382 i0 81.068 92.7641509433962 206 39 97 0 7 212 443306 443511 Anaeromyxobacter oryzae DNA, complete genome blastn 19666 165 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter oryzae
22002571 22002571 PRJNA1199330_P_NODE_59398_length_291_cov_1.788991_g58699_i0 PRJNA1199330 59398 291 1.788991 5.20596381 Vulgatibacter incomptus 1391653 Bacteria Bacteria 457 4.89e-124   NTclustered gi|913607065|gb|CP012332.1| 1391653 g58699 i0 94.898 277.082474226804 294 12 100 3 1 291 179674 179381 Vulgatibacter incomptus strain DSM 27710, complete genome blastn 80631 457 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Vulgatibacteraceae Vulgatibacter Vulgatibacter incomptus
26787862 26787862 PRJNA1199330_P_NODE_56781_length_293_cov_2.754545_g56082_i0 PRJNA1199330 56781 293 2.754545 8.07081685 Sorangium cellulosum 56 Bacteria Bacteria 43.1 0.0499   NR WP_129348003.1 56 g56082 i0 55.6 0.368600682593857 36 16 36.9 0 76 183 398 433 WP_129348003.1 S8 family serine peptidase [Sorangium cellulosum] diamond 108 43.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
26914257 26914257 PRJNA1199330_P_NODE_102982_length_251_cov_1.752809_g102283_i0 PRJNA1199330 102982 251 1.752809 4.39955059 Myxococcales bacterium 2026763 Bacteria Bacteria 52.4 1.63e-5   NR MCA1825563.1 2026763 g102283 i0 47.1 0.609561752988048 51 27 61 0 153 1 3 53 MCA1825563.1 AMP-binding protein [Myxococcales bacterium] diamond 153 52.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27135354 27135354 PRJNA1199330_P_NODE_95342_length_258_cov_1.481081_g94643_i0 PRJNA1199330 95342 258 1.481081 3.82118898 Myxococcota bacterium 2818507 Bacteria Bacteria 43.9 0.0171   NR MEE8410011.1 2818507 g94643 i0 41.8 0.63953488372093 55 32 64 0 188 24 381 435 MEE8410011.1 hypothetical protein [Myxococcota bacterium] diamond 165 43.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27609734 27609734 PRJNA1199330_P_NODE_91204_length_262_cov_1.650794_g90505_i0 PRJNA1199330 91204 262 1.650794 4.32508028 Myxococcales bacterium FL481 1979545 Bacteria Bacteria 87.8 1e-19   NR TPV94734.1 1979545 g90505 i0 50.6 2.94274809160305 87 43 99.6 0 2 262 28 114 TPV94734.1 MAG: hypothetical protein B7733_13670 [Myxococcales bacterium FL481] diamond 771 87.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium FL481
27672974 27672974 PRJNA1199330_P_NODE_98844_length_254_cov_2.132597_g98145_i0 PRJNA1199330 98844 254 2.132597 5.41679638 Myxococcales bacterium 2026763 Bacteria Bacteria 42.7 0.0435   NR MDB4967310.1 2026763 g98145 i0 44.7 0.55511811023622 47 25 55.5 1 177 37 628 673 MDB4967310.1 Tetratricopeptide 2 repeat protein [Myxococcales bacterium] diamond 141 42.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28020278 28020278 PRJNA1199330_P_NODE_65985_length_285_cov_2.193396_g65286_i0 PRJNA1199330 65985 285 2.193396 6.2511786 Enhygromyxa salina 215803 Bacteria Bacteria 111 1.86e-27   NR WP_106391069.1 215803 g65286 i0 63 1.75789473684211 81 30 85.3 0 244 2 68 148 WP_106391069.1 poly(ADP-ribose) glycohydrolase domain-containing protein [Enhygromyxa salina] diamond 501 111 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
28304238 28304238 PRJNA1199330_P_NODE_117986_length_238_cov_2.830303_g117287_i0 PRJNA1199330 117986 238 2.830303 6.73612114 Kofleriaceae bacterium 2212474 Bacteria Bacteria 53.5 5.05e-6   NR HTM18996.1 2212474 g117287 i0 44.4 2.09243697478992 81 33 92 3 19 237 188 264 HTM18996.1 serine protease [Kofleriaceae bacterium] diamond 498 53.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28777753 28777753 PRJNA1199330_P_NODE_41287_length_321_cov_1.467742_g40588_i0 PRJNA1199330 41287 321 1.467742 4.71145182 Kofleriaceae bacterium 2212474 Bacteria Bacteria 68.6 5.6e-11   NR HEY6037536.1 2212474 g40588 i0 40.7 2.51401869158878 108 56 94.4 3 1 303 150 256 HEY6037536.1 hypothetical protein [Kofleriaceae bacterium] diamond 807 68.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28999273 28999273 PRJNA1199330_P_NODE_73848_length_278_cov_2.092683_g73149_i0 PRJNA1199330 73848 278 2.092683 5.81765874 Polyangium fumosum 889272 Bacteria Bacteria 74.7 3.32e-13   NR WP_136926967.1 889272 g73149 i0 48.8 0.928057553956835 86 43 92.8 1 6 263 1271 1355 WP_136926967.1 type I polyketide synthase [Polyangium fumosum] diamond 258 74.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium fumosum
29440626 29440626 PRJNA1199330_P_NODE_106790_length_248_cov_3.308571_g106091_i0 PRJNA1199330 106790 248 3.308571 8.20525608 Myxococcota bacterium 2818507 Bacteria Bacteria 52 1.93e-5   NR MEO1270141.1 2818507 g106091 i0 52.1 1.39112903225806 48 21 58.1 1 57 200 249 294 MEO1270141.1 ABC transporter substrate-binding protein [Myxococcota bacterium] diamond 345 52 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29788084 29788084 PRJNA1199330_P_NODE_66771_length_284_cov_4.222749_g66072_i0 PRJNA1199330 66771 284 4.222749 11.99260716 Archangium gephyra 48 Bacteria Bacteria 43.9 0.00813   NR AKJ00852.1 48 g66072 i0 30.4 1.95422535211268 79 55 83.5 0 261 25 47 125 AKJ00852.1 Hypothetical protein AA314_02478 [Archangium gephyra] diamond 555 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
29946289 29946289 PRJNA1199330_P_NODE_64351_length_287_cov_1.149533_g63652_i0 PRJNA1199330 64351 287 1.149533 3.29915971 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.9 0.0248   NR MDR2140480.1 2026735 g63652 i0 33.9 0.616724738675958 59 39 61.7 0 50 226 133 191 MDR2140480.1 ATP-dependent RecD-like DNA helicase [Deltaproteobacteria bacterium] diamond 177 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30546481 30546481 PRJNA1199330_P_NODE_115233_length_242_cov_3.656805_g114534_i0 PRJNA1199330 115233 242 3.656805 8.8494681 Cystobacter fuscus 43 Bacteria Bacteria 52 1.99e-5   NR WP_095985960.1 43 g114534 i0 39.3 5.20661157024793 84 42 97.9 3 241 5 218 297 WP_095985960.1 phosphatidylinositol-specific phospholipase C [Cystobacter fuscus] diamond 1260 52 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
30641112 30641112 PRJNA1199330_P_NODE_54633_length_297_cov_1.044643_g53934_i0 PRJNA1199330 54633 297 1.044643 3.10258971 Myxococcales bacterium 2026763 Bacteria Bacteria 72.4 1.41e-12   NR MBL8680445.1 2026763 g53934 i0 58.1 0.626262626262626 62 26 62.6 0 111 296 5 66 MBL8680445.1 SDR family NAD(P)-dependent oxidoreductase [Myxococcales bacterium] diamond 186 72.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30988930 30988930 PRJNA1199330_P_NODE_22494_length_432_cov_1.529248_g21800_i0 PRJNA1199330 22494 432 1.529248 6.60635136 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.1 0.0193   NR MBM4321556.1 2026735 g21800 i0 38.2 0.527777777777778 76 40 50.7 4 53 271 1 72 MBM4321556.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 228 43.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31273250 31273250 PRJNA1199330_P_NODE_33875_length_355_cov_4.209220_g33176_i0 PRJNA1199330 33875 355 4.20922 14.942731 Polyangiaceae bacterium 2268199 Bacteria Bacteria 67.8 2.04e-10   NR MBK9258989.1 2268199 g33176 i0 67.6 0.692957746478873 37 12 31.3 0 135 245 410 446 MBK9258989.1 hypothetical protein [Polyangiaceae bacterium] diamond 246 67.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31368370 31368370 PRJNA1199330_P_NODE_40076_length_326_cov_2.181818_g39377_i0 PRJNA1199330 40076 326 2.181818 7.11272668 Polyangiaceae bacterium 2268199 Bacteria Bacteria 56.2 6.44e-7   NR HMJ57057.1 2268199 g39377 i0 36.4 0.607361963190184 66 41 59.8 1 4 198 111 176 HMJ57057.1 hypothetical protein [Polyangiaceae bacterium] diamond 198 56.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31811000 31811000 PRJNA1199330_P_NODE_92577_length_260_cov_3.705882_g91878_i0 PRJNA1199330 92577 260 3.705882 9.6352932 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.7 0.00644   NR UCD85975.1 2026735 g91878 i0 53.7 0.473076923076923 41 16 43.8 1 120 233 113 153 UCD85975.1 MAG: hypothetical protein JSU92_07220 [Deltaproteobacteria bacterium] diamond 123 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32190698 32190698 PRJNA1199330_P_NODE_120578_length_232_cov_2.817610_g119879_i0 PRJNA1199330 120578 232 2.81761 6.5368552 Minicystis rosea 888845 Bacteria Bacteria 45.4 0.00358   NR APR75041.1 888845 g119879 i0 48.3 0.75 58 28 73.7 2 31 201 17 73 APR75041.1 serine/threonine protein kinase [Minicystis rosea] diamond 174 45.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
32349069 32349069 PRJNA1199330_P_NODE_38219_length_334_cov_5.720307_g37520_i0 PRJNA1199330 38219 334 5.720307 19.10582538 Myxococcales bacterium 2026763 Bacteria Bacteria 153 4.58e-45   NR TFG97927.1 2026763 g37520 i0 73.3 0.808383233532934 90 24 80.8 0 329 60 67 156 TFG97927.1 MAG: GFA family protein [Myxococcales bacterium] diamond 270 153 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32696158 32696158 PRJNA1199330_P_NODE_42540_length_315_cov_3.954545_g41841_i0 PRJNA1199330 42540 315 3.954545 12.45681675 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 160 1.3e-48   NR MAJ48576.1 2026735 g41841 i0 86.2 6.23809523809524 94 13 89.5 0 314 33 11 104 MAJ48576.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 1965 160 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;