RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1199330", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1199330 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6703082 6703082 PRJNA1199330_P_NODE_20266_length_455_cov_1.426702_g19572_i0 PRJNA1199330 20266 455 1.426702 6.4914941 Metazoa 33208 Platyhelminthes Platyhelminthes 198 4.93e-57   NR KAA0193652.1 27845 g19572 i0 64.2 37.8197802197802 151 54 99.6 0 3 455 291 441 KAA0193652.1 Heat shock protein S [Fasciolopsis buskii] diamond 17208 199 0.994974874371859 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
10529580 10529580 PRJNA1199330_P_NODE_54029_length_298_cov_2.511111_g53330_i0 PRJNA1199330 54029 298 2.511111 7.48311078 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 113 1.25e-20   NTclustered gi|690473205|emb|LN013397.1| 99802 g53330 i0 84.615 1.49328859060403 117 14 39 4 4 118 2382 2496 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0013223 blastn 445 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
26882870 26882870 PRJNA1199330_P_NODE_40481_length_324_cov_3.657371_g39782_i0 PRJNA1199330 40481 324 3.657371 11.84988204 Trichobilharzia szidati 157070 Platyhelminthes Platyhelminthes 87.4 1.73e-17   NR CAH8862753.1 157070 g39782 i0 44.8 1.57407407407407 87 45 77.8 1 253 2 20 106 CAH8862753.1 unnamed protein product [Trichobilharzia szidati] diamond 510 87.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia szidati
31102347 31102347 PRJNA1199330_P_NODE_101655_length_252_cov_1.424581_g100956_i0 PRJNA1199330 101655 252 1.424581 3.58994412 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 4.05e-27   NR CAX83045.1 6182 g100956 i0 62.7 14.8571428571429 75 28 89.3 0 25 249 29 103 CAX83045.1 60S ribosomal protein L8, partial [Schistosoma japonicum] diamond 3744 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;