RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1199330", tax_kingdom = "Bamfordvirae" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1199330 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28588632 28588632 PRJNA1199330_P_NODE_98027_length_255_cov_1.714286_g97328_i0 PRJNA1199330 98027 255 1.714286 4.3714293 Zebrafish jaw poxvirus RQ14 Viruses Viruses 96.7 4.1200000000000003e-22   NR BCT22606.1 RQ14 g97328 i0 49.3 0.858823529411765 73 37 85.9 0 4 222 191 263 BCT22606.1 hypothetical protein AL387_gp060 [Carp edema virus] diamond 219 96.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
29156990 29156990 PRJNA1199330_P_NODE_81029_length_271_cov_4.914141_g80330_i0 PRJNA1199330 81029 271 4.914141 13.31732211 Ostreococcus tauri virus 70448 Viruses Viruses 44.7 0.00915   NR XKM46844.1 3378358 g80330 i0 33.3 1.02952029520295 93 58 99.6 3 271 2 106 197 XKM46844.1 hypothetical protein OtV06-1_00160 [Ostreococcus tauri virus 06-1] diamond 279 44.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 06-1
31431347 31431347 PRJNA1199330_P_NODE_19296_length_466_cov_1.447837_g18602_i0 PRJNA1199330 19296 466 1.447837 6.74692042 Yasminevirus sp. GU-2 3060817 Viruses Viruses 148 7.68e-41   NR VBB18130.1 2420051 g18602 i0 48.4 1.02360515021459 159 71 95.3 2 2 445 37 195 VBB18130.1 Piso0_000558 [Yasminevirus sp. GU-2018] diamond 477 148 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;