RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1199330", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA1199330 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27420468 27420468 PRJNA1199330_P_NODE_16323_length_506_cov_3.875289_g15633_i0 PRJNA1199330 16323 506 3.875289 19.60896234 Armatimonadota bacterium 2033014 Bacteria Bacteria 144 1.83e-39   NR GDX40226.1 2033014 g15633 i0 46.3 0.972332015810277 164 83 95.5 4 6 488 66 227 GDX40226.1 hypothetical protein LBMAG21_05180 [Armatimonadota bacterium] diamond 492 144 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28607331 28607331 PRJNA1199330_P_NODE_99627_length_253_cov_2.483333_g98928_i0 PRJNA1199330 99627 253 2.483333 6.28283249 PVC group 1783257 Bacteria Bacteria 79 7.16e-15   NR MCW3061757.1 2494211 g98928 i0 47.6 3.91304347826087 82 39 97.2 2 248 3 413 490 MCW3061757.1 putative glycosyl hydrolase [Capsulimonas sp.] diamond 990 79 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
29220069 29220069 PRJNA1199330_P_NODE_121109_length_231_cov_2.367089_g120410_i0 PRJNA1199330 121109 231 2.367089 5.46797559 Armatimonas rosea 685828 Bacteria Bacteria 63.2 1.98e-9   NR WP_184193152.1 685828 g120410 i0 45.3 0.974025974025974 75 26 77.9 1 203 24 291 365 WP_184193152.1 alpha-amylase family glycosyl hydrolase [Armatimonas rosea] diamond 225 63.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
32633014 32633014 PRJNA1199330_P_NODE_27900_length_390_cov_2.646688_g27204_i0 PRJNA1199330 27900 390 2.646688 10.3220832 Armatimonadota bacterium 2033014 Bacteria Bacteria 148 1.53e-38   NR HET6386082.1 2033014 g27204 i0 53.5 3.96153846153846 129 60 99.2 0 387 1 187 315 HET6386082.1 pectinesterase family protein [Armatimonadota bacterium] diamond 1545 148 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;