RNAquarium Metadata Server
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contig_metadata

23 rows where bioproject = "PRJNA1199330", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 23 ✖

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJNA1199330 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2875891 2875891 PRJNA1199330_P_NODE_117283_length_240_cov_2.395210_g116584_i0 PRJNA1199330 117283 240 2.39521 5.748504 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 427 3.07e-115   NTclustered gi|66358459|ref|XM_626408.1| 353152 g116584 i0 98.75 3.98333333333333 240 3 100 0 1 240 523 762 Cryptosporidium parvum Iowa II hypothetical protein (cgd2_2010) partial mRNA blastn 956 427 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
2876776 2876776 PRJNA1199330_P_NODE_65203_length_286_cov_1.464789_g64504_i0 PRJNA1199330 65203 286 1.464789 4.18929654 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 523 4.659999999999998e-144   NTclustered gi|66358619|ref|XM_626488.1| 353152 g64504 i0 99.65 2 286 1 100 0 1 286 476 761 Cryptosporidium parvum Iowa II large WD repeat protein (cgd2_2910) partial mRNA blastn 572 523 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
2877268 2877268 PRJNA1199330_P_NODE_99183_length_254_cov_1.436464_g98484_i0 PRJNA1199330 99183 254 1.436464 3.64861856 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 431 2.539999999999999e-116   NTclustered gi|66361805|ref|XM_627867.1| 353152 g98484 i0 97.244 3.99606299212598 254 7 100 0 1 254 605 858 Cryptosporidium parvum Iowa II UDP-galactose transporter, predicted signal peptide and 9 transmembrane domains (cgd1_40) mRNA, complete cds blastn 1015 431 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
4153135 4153135 PRJNA1199330_P_NODE_84644_length_268_cov_2.138462_g83945_i0 PRJNA1199330 84644 268 2.138462 5.73107816 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 292 1.33e-74   NTclustered gi|126654165|ref|XM_001388361.1| 353152 g83945 i0 99.379 1.73507462686567 161 1 60 0 1 161 1124 1284 Cryptosporidium parvum Iowa II pleiotropic regulator 1 (cgd7_3960) partial mRNA blastn 465 292 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
9252904 9252904 PRJNA1199330_P_NODE_109788_length_246_cov_2.901734_g109089_i0 PRJNA1199330 109788 246 2.901734 7.13826564 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 276 1.21e-69   NTclustered gi|66360431|ref|XM_627245.1| 353152 g109089 i0 87.5 2.01219512195122 248 19 98 6 5 246 2819 2578 Cryptosporidium parvum Iowa II secreted protein with cysteine rich repeats and a mucin like threonine rich repeat, signal peptide (cgd8_3520) partial mRNA blastn 495 276 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
10529687 10529687 PRJNA1199330_P_NODE_61589_length_289_cov_1.925926_g60890_i0 PRJNA1199330 61589 289 1.925926 5.56592614 Plasmodium fragile 5857 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.6e-4   NTclustered gi|817736334|ref|XM_012477701.1| 5857 g60890 i0 100 3.2076124567474 32 0 11 0 233 264 610 641 Plasmodium fragile uncharacterized protein (AK88_00050), partial mRNA blastn 927 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
12523295 12523295 PRJNA1199330_P_NODE_94110_length_259_cov_1.935484_g93411_i0 PRJNA1199330 94110 259 1.935484 5.01290356 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 185 2.2299999999999993e-42   NTclustered gi|67623426|ref|XM_662904.1| 353151 g93411 i0 100 1.15057915057915 100 0 39 0 1 100 558 657 Cryptosporidium hominis TU502 ribosomal protein L1 (Chro.80334) partial mRNA blastn 298 185 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
13079332 13079332 PRJNA1199330_P_NODE_51291_length_301_cov_3.043860_g50592_i0 PRJNA1199330 51291 301 3.04386 9.1620186 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 267 9.19e-67   NTclustered gi|66362515|ref|XM_628222.1| 353152 g50592 i0 98.052 1.62790697674419 154 2 51 1 2 155 234 82 Cryptosporidium parvum Iowa II putative 60S ribosomal protein L18A (cgd7_320) partial mRNA blastn 490 267 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
13797252 13797252 PRJNA1199330_P_NODE_114251_length_243_cov_2.170588_g113552_i0 PRJNA1199330 114251 243 2.170588 5.27452884 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 193 1.24e-44   NTclustered gi|2785765936|ref|XM_067218065.1| 5824 g113552 i0 83.575 166.213991769547 207 32 85 2 7 212 425 220 Plasmodium brasilianum polyubiquitin (MKS88_004855), partial mRNA blastn 40390 193 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
14354156 14354156 PRJNA1199330_P_NODE_123492_length_219_cov_7.828767_g122793_i0 PRJNA1199330 123492 219 7.828767 17.14499973 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 274 3.8e-69   NTclustered gi|66357575|ref|XM_625966.1| 353152 g122793 i0 96.933 0.74429223744292194 163 5 74 0 1 163 666 504 Cryptosporidium parvum Iowa II signal peptide containing protein (cgd5_10) partial mRNA blastn 163 274 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
15628345 15628345 PRJNA1199330_P_NODE_36713_length_341_cov_3.067164_g36014_i0 PRJNA1199330 36713 341 3.067164 10.45902924 Cryptosporidium hominis 237895 SAR_Eukaryotes SAR_Eukaryotes 592 1.54e-164   NTclustered gi|67623438|ref|XM_662910.1| 353151 g36014 i0 97.947 5.41055718475073 341 7 100 0 1 341 2060 1720 Cryptosporidium hominis TU502 elongation factor 2 (EF-2) (Chro.80341) partial mRNA blastn 1845 592 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
16903130 16903130 PRJNA1199330_P_NODE_71454_length_280_cov_2.608696_g70755_i0 PRJNA1199330 71454 280 2.608696 7.3043488 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|124506148|ref|XM_001351636.1| 36329 g70755 i0 100 0.103571428571429 29 0 10 0 197 225 24726 24698 Plasmodium falciparum 3D7 RNA pseudouridylate synthase, putative (PF3D7_0511500), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
18895301 18895301 PRJNA1199330_P_NODE_101935_length_252_cov_0.871508_g101236_i0 PRJNA1199330 101935 252 0.871508 2.19620016 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 444 3.2299999999999996e-120   NTclustered gi|67623122|ref|XM_662752.1| 353151 g101236 i0 98.413 2.99603174603175 252 4 100 0 1 252 470 219 Cryptosporidium hominis TU502 multi-pass transmembrane protein (Chro.60348) partial mRNA blastn 755 444 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
19451009 19451009 PRJNA1199330_P_NODE_107436_length_248_cov_1.611429_g106737_i0 PRJNA1199330 107436 248 1.611429 3.99634392 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 453 5.2600000000000005e-123   NTclustered gi|126654502|ref|XM_001388385.1| 353152 g106737 i0 99.597 1.99193548387097 248 1 100 0 1 248 2923 2676 Cryptosporidium parvum Iowa II coatomer protein complex subunit alpha, putative (cgd8_860) mRNA, partial cds blastn 494 453 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
22002555 22002555 PRJNA1199330_P_NODE_58318_length_292_cov_1.424658_g57619_i0 PRJNA1199330 58318 292 1.424658 4.16000136 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 470 6.3e-128   NTclustered gi|2787708237|ref|XM_067344855.1| 1280935 g57619 i0 95.862 2.5 290 12 99 0 1 290 115 404 Cryptosporidium sp. chipmunk genotype I uncharacterized protein (ELE39_002005), partial mRNA blastn 730 470 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
23277032 23277032 PRJNA1199330_P_NODE_101139_length_252_cov_2.424581_g100440_i0 PRJNA1199330 101139 252 2.424581 6.10994412 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 442 1.1599999999999995e-119   NTclustered gi|66358035|ref|XM_626196.1| 353152 g100440 i0 98.406 1.99206349206349 251 4 99 0 2 252 633 383 Cryptosporidium parvum Iowa II Alg5 like dolichyl-phosphate beta-glucosyltransferase (cgd5_2590) partial mRNA blastn 502 442 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
23278120 23278120 PRJNA1199330_P_NODE_65259_length_286_cov_1.464789_g64560_i0 PRJNA1199330 65259 286 1.464789 4.18929654 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 508 1.3e-139   NTclustered gi|66358693|ref|XM_626525.1| 353152 g64560 i0 98.944 2.97902097902098 284 3 99 0 1 284 137 420 Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3350) partial mRNA blastn 852 508 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
23278393 23278393 PRJNA1199330_P_NODE_85899_length_267_cov_1.608247_g85200_i0 PRJNA1199330 85899 267 1.608247 4.29401949 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 472 1.5799999999999998e-128   NTclustered gi|66357835|ref|XM_626096.1| 353152 g85200 i0 98.502 2.9812734082397 267 4 100 0 1 267 1920 1654 Cryptosporidium parvum Iowa II large cysteine rich protein (cgd5_1490) partial mRNA blastn 796 472 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
24551057 24551057 PRJNA1199330_P_NODE_107400_length_248_cov_1.725714_g106701_i0 PRJNA1199330 107400 248 1.725714 4.27977072 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 429 8.869999999999998e-116   NTclustered gi|66357645|ref|XM_626001.1| 353152 g106701 i0 97.984 2 248 4 99 1 1 247 1932 2179 Cryptosporidium parvum Iowa II putative eukaryotic translation initiation factor 3 (cgd5_390) partial mRNA blastn 496 429 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
26901781 26901781 PRJNA1199330_P_NODE_77681_length_275_cov_1.321782_g76982_i0 PRJNA1199330 77681 275 1.321782 3.6349005 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 56.2 9.83e-7   NR XP_067714729.1 5871 g76982 i0 50 2.19272727272727 50 24 54.5 1 9 158 235 283 XP_067714729.1 apical complex lysine methyltransferase [Babesia caballi] diamond 603 56.6 0.992932862190813 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
27357205 27357205 PRJNA1199330_P_NODE_90223_length_263_cov_1.642105_g89524_i0 PRJNA1199330 90223 263 1.642105 4.31873615 Babesia divergens 32595 SAR_Eukaryotes SAR_Eukaryotes 54.3 4.05e-6   NR KAK1937509.1 32595 g89524 i0 44.3 0.798479087452472 70 32 79.8 1 254 45 109 171 KAK1937509.1 putative DNA topoisomerase [Babesia divergens] diamond 210 54.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia divergens
28196727 28196727 PRJNA1199330_P_NODE_28986_length_383_cov_2.977419_g28290_i0 PRJNA1199330 28986 383 2.977419 11.40351477 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00793   NR KAF4638293.1 5811 g28290 i0 42.4 4.15926892950392 66 33 51.7 2 382 185 153 213 KAF4638293.1 zinc finger protein ZFP1 [Toxoplasma gondii] diamond 1593 46.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
32570600 32570600 PRJNA1199330_P_NODE_8839_length_707_cov_31.630915_g8204_i0 PRJNA1199330 8839 707 31.630915 223.63056905 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.0295   NR OEH78494.1 88456 g8204 i0 52.4 0.356435643564356 42 19 17.8 1 371 496 290 330 OEH78494.1 microneme protein [Cyclospora cayetanensis] diamond 252 47.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;