contig_metadata
16 rows where bioproject = "PRJNA1199330", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6147213 | 6147213 | PRJNA1199330_P_NODE_54365_length_297_cov_3.165179_g53666_i0 | PRJNA1199330 | 54365 | 297 | 3.165179 | 9.40058163 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 86.1 | 2.72e-12 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g53666 | i0 | 85.366 | 0.552188552188552 | 82 | 12 | 28 | 0 | 31 | 112 | 5154017 | 5153936 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 164 | 86.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24551163 | 24551163 | PRJNA1199330_P_NODE_114740_length_243_cov_0.917647_g114041_i0 | PRJNA1199330 | 114740 | 243 | 0.917647 | 2.22988221 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 82.8 | 5.3e-17 | NR | QTN31272.1 | 2562705 | g114041 | i0 | 56.7 | 1.58024691358025 | 67 | 29 | 82.7 | 0 | 230 | 30 | 7 | 73 | QTN31272.1 glucosamine-6-phosphate deaminase [Akkermansiaceae bacterium] | diamond | 384 | 82.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 27103998 | 27103998 | PRJNA1199330_P_NODE_58882_length_291_cov_2.779817_g58183_i0 | PRJNA1199330 | 58882 | 291 | 2.779817 | 8.08926747 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 64.3 | 1.02e-9 | NR | MDB6056527.1 | 2026801 | g58183 | i0 | 47.6 | 0.845360824742268 | 82 | 42 | 83.5 | 1 | 45 | 287 | 59 | 140 | MDB6056527.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform [Verrucomicrobiales bacterium] | diamond | 246 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 29346303 | 29346303 | PRJNA1199330_P_NODE_53489_length_299_cov_1.371681_g52790_i0 | PRJNA1199330 | 53489 | 299 | 1.371681 | 4.10132619 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 56.6 | 7.51e-7 | NR | MCH8475895.1 | 2026772 | g52790 | i0 | 52.7 | 0.551839464882943 | 55 | 17 | 55.2 | 1 | 219 | 55 | 209 | 254 | MCH8475895.1 LamG domain-containing protein [Opitutales bacterium] | diamond | 165 | 56.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 29756524 | 29756524 | PRJNA1199330_P_NODE_106931_length_248_cov_2.645714_g106232_i0 | PRJNA1199330 | 106931 | 248 | 2.645714 | 6.56137072 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 42.4 | 0.0474 | NR | HEV7406036.1 | 2811408 | g106232 | i0 | 43.2 | 0.44758064516129 | 37 | 21 | 44.8 | 0 | 247 | 137 | 100 | 136 | HEV7406036.1 ankyrin repeat domain-containing protein [Chthoniobacteraceae bacterium] | diamond | 111 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 29933658 | 29933658 | PRJNA1199330_P_NODE_117151_length_240_cov_2.730539_g116452_i0 | PRJNA1199330 | 117151 | 240 | 2.730539 | 6.5532936 | Opitutaceae | 134623 | Bacteria | Bacteria | 42.7 | 0.0346 | NR | MEX2043917.1 | 1913982 | g116452 | i0 | 40.8 | 3.0875 | 49 | 24 | 61.3 | 1 | 85 | 231 | 13 | 56 | MEX2043917.1 prepilin peptidase [Opitutus sp.] | diamond | 741 | 43.1 | 0.990719257540603 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 29933661 | 29933661 | PRJNA1199330_P_NODE_52531_length_300_cov_3.132159_g51832_i0 | PRJNA1199330 | 52531 | 300 | 3.132159 | 9.396477 | Bacteria | 2 | Bacteria | Bacteria | 49.3 | 3.45e-4 | NR | HUB66694.1 | 2720631 | g51832 | i0 | 46.7 | 2.13 | 60 | 32 | 60 | 0 | 185 | 6 | 52 | 111 | HUB66694.1 ankyrin repeat domain-containing protein [Candidatus Methylacidiphilales bacterium] | diamond | 639 | 49.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Candidatus Methylacidiphilales bacterium | |||
| 29946290 | 29946290 | PRJNA1199330_P_NODE_64771_length_286_cov_2.361502_g64072_i0 | PRJNA1199330 | 64771 | 286 | 2.361502 | 6.75389572 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 47.4 | 3.12e-4 | NR | MBV8416944.1 | 2026799 | g64072 | i0 | 34.7 | 2.16083916083916 | 72 | 47 | 75.5 | 0 | 234 | 19 | 39 | 110 | MBV8416944.1 tetratricopeptide repeat protein [Verrucomicrobiota bacterium] | diamond | 618 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30546502 | 30546502 | PRJNA1199330_P_NODE_68553_length_283_cov_1.485714_g67854_i0 | PRJNA1199330 | 68553 | 283 | 1.485714 | 4.20457062 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 43.9 | 0.0197 | NR | MCA1962363.1 | 1965333 | g67854 | i0 | 34.4 | 0.646643109540636 | 61 | 40 | 64.7 | 0 | 90 | 272 | 107 | 167 | MCA1962363.1 hypothetical protein [Prosthecobacter sp.] | diamond | 183 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 30641096 | 30641096 | PRJNA1199330_P_NODE_118793_length_236_cov_3.355828_g118094_i0 | PRJNA1199330 | 118793 | 236 | 3.355828 | 7.91975408 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 67.8 | 4.97e-11 | NR | HEY3915274.1 | 2499141 | g118094 | i0 | 46.4 | 3.53389830508475 | 69 | 37 | 87.7 | 0 | 28 | 234 | 303 | 371 | HEY3915274.1 DUF4982 domain-containing protein [Verrucomicrobiia bacterium] | diamond | 834 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 30672737 | 30672737 | PRJNA1199330_P_NODE_57153_length_293_cov_1.931818_g56454_i0 | PRJNA1199330 | 57153 | 293 | 1.931818 | 5.66022674 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 75.9 | 1.14e-14 | NR | MCX6913889.1 | 2026799 | g56454 | i0 | 47.2 | 0.737201365187713 | 72 | 38 | 73.7 | 0 | 76 | 291 | 52 | 123 | MCX6913889.1 PA14 domain-containing protein [Verrucomicrobiota bacterium] | diamond | 216 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31640005 | 31640005 | PRJNA1199330_P_NODE_16136_length_509_cov_3.052752_g15446_i0 | PRJNA1199330 | 16136 | 509 | 3.052752 | 15.53850768 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 107 | 1.0699999999999997e-23 | NR | AKC83384.1 | 1637999 | g15446 | i0 | 46.6 | 2.30451866404715 | 118 | 55 | 64.8 | 2 | 384 | 55 | 30 | 147 | AKC83384.1 hypothetical protein IMCC26134_12420 [Verrucomicrobia bacterium IMCC26134] | diamond | 1173 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 32051339 | 32051339 | PRJNA1199330_P_NODE_94418_length_259_cov_1.408602_g93719_i0 | PRJNA1199330 | 94418 | 259 | 1.408602 | 3.64827918 | PVC group | 1783257 | Bacteria | Bacteria | 50.4 | 8.53e-5 | NR | MBP9902046.1 | 2026799 | g93719 | i0 | 36.9 | 2.86100386100386 | 84 | 52 | 97.3 | 1 | 3 | 254 | 243 | 325 | MBP9902046.1 serine/threonine protein kinase [Verrucomicrobiota bacterium] | diamond | 741 | 50.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32664555 | 32664555 | PRJNA1199330_P_NODE_24340_length_416_cov_2.655977_g23644_i0 | PRJNA1199330 | 24340 | 416 | 2.655977 | 11.04886432 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 64.3 | 6.38e-9 | NR | MEY4917918.1 | 2026799 | g23644 | i0 | 32.1 | 1.96875 | 140 | 74 | 92.3 | 6 | 399 | 16 | 78 | 208 | MEY4917918.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 819 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32790496 | 32790496 | PRJNA1199330_P_NODE_86800_length_266_cov_2.056995_g86101_i0 | PRJNA1199330 | 86800 | 266 | 2.056995 | 5.4716067 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 68.2 | 4.14e-11 | NR | MEI7955772.1 | 2026799 | g86101 | i0 | 36.6 | 4.6015037593985 | 82 | 39 | 92.5 | 2 | 7 | 252 | 209 | 277 | MEI7955772.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 1224 | 68.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32822166 | 32822166 | PRJNA1199330_P_NODE_36140_length_344_cov_2.276753_g35441_i0 | PRJNA1199330 | 36140 | 344 | 2.276753 | 7.83203032 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 77.4 | 8.22e-14 | NR | HXI84029.1 | 2499141 | g35441 | i0 | 63.6 | 0.575581395348837 | 66 | 22 | 57.6 | 2 | 299 | 102 | 227 | 290 | HXI84029.1 NF038122 family metalloprotease [Verrucomicrobiia bacterium] | diamond | 198 | 77.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;