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contig_metadata

16 rows where bioproject = "PRJNA1198392", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 16 ✖

tax_phylum 1

  • Myxococcota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1198392 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
324461 324461 PRJNA1198392_P_NODE_12921_length_268_cov_1.256410_g12780_i0 PRJNA1198392 12921 268 1.25641 3.3671788 Minicystis rosea 888845 Bacteria Bacteria 110 1.44e-19   NTclustered gi|1127353251|gb|CP016211.1| 888845 g12780 i0 91.25 2.67910447761194 80 7 30 0 186 265 3013390 3013311 Minicystis rosea strain DSM 24000 chromosome, complete genome blastn 718 110 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
4151738 4151738 PRJNA1198392_P_NODE_8424_length_289_cov_1.907407_g8283_i0 PRJNA1198392 8424 289 1.907407 5.51240623 Polyangiales bacterium 3034171 Bacteria Bacteria 166 6.39e-51   NR MEO7094792.1 3034171 g8283 i0 90.6 1.99307958477509 96 9 99.7 0 289 2 5 100 MEO7094792.1 50S ribosomal protein L22 [Polyangiales bacterium] diamond 576 166 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
6702501 6702501 PRJNA1198392_P_NODE_2246_length_495_cov_1.459716_g2105_i0 PRJNA1198392 2246 495 1.459716 7.2255942 Pendulispora albinea 2741071 Bacteria Bacteria 636 1.0499999999999998e-177   NTclustered gi|2698035964|gb|CP089984.1| 2741071 g2105 i0 90.141 137.442424242424 497 38 99 9 5 495 3589271 3588780 Pendulispora albinea strain MSr11954 chromosome, complete genome blastn 68034 636 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora albinea
7978141 7978141 PRJNA1198392_P_NODE_7227_length_305_cov_1.336207_g7086_i0 PRJNA1198392 7227 305 1.336207 4.07543135 Pendulispora rubella 2741070 Bacteria Bacteria 433 8.69e-117   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g7086 i0 92.208 126.986885245902 308 20 100 4 1 305 7289706 7289400 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 38731 433 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
9252594 9252594 PRJNA1198392_P_NODE_21168_length_241_cov_0.916667_g21027_i0 PRJNA1198392 21168 241 0.916667 2.20916747 Anaeromyxobacter paludicola 2918171 Bacteria Bacteria 115 2.73e-21   NTclustered gi|2199271117|dbj|AP025592.1| 2918171 g21027 i0 93.506 8.90041493775934 77 5 32 0 2 78 1383634 1383558 Anaeromyxobacter paludicola DNA, complete genome blastn 2145 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter paludicola
9252773 9252773 PRJNA1198392_P_NODE_9448_length_285_cov_1.363208_g9307_i0 PRJNA1198392 9448 285 1.363208 3.8851428 Labilithrix luteola 1391654 Bacteria Bacteria 366 8.28e-97   NTclustered gi|913610804|gb|CP012333.1| 1391654 g9307 i0 90.614 0.971929824561404 277 24 97 2 2 277 5311062 5311337 Labilithrix luteola strain DSM 27648, complete genome blastn 277 366 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
11247084 11247084 PRJNA1198392_P_NODE_8429_length_289_cov_1.884259_g8288_i0 PRJNA1198392 8429 289 1.884259 5.44550851 Corallococcus 83461 Bacteria Bacteria 252 2.46e-62   NTclustered gi|2851136330|gb|CP172866.1| 184914 g8288 i0 82.534 99.7923875432526 292 45 100 6 1 289 8994959 8994671 Corallococcus coralloides strain KYC2213 chromosome, complete genome blastn 28840 252 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus coralloides
20725833 20725833 PRJNA1198392_P_NODE_13397_length_265_cov_1.604167_g13256_i0 PRJNA1198392 13397 265 1.604167 4.25104255 Labilithrix luteola 1391654 Bacteria Bacteria 150 8.349999999999998e-32   NTclustered gi|913610804|gb|CP012333.1| 1391654 g13256 i0 83.974 54.8264150943396 156 25 59 0 108 263 2661291 2661136 Labilithrix luteola strain DSM 27648, complete genome blastn 14529 150 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
26977609 26977609 PRJNA1198392_P_NODE_20482_length_242_cov_1.822485_g20341_i0 PRJNA1198392 20482 242 1.822485 4.4104137 Myxococcota bacterium 2818507 Bacteria Bacteria 80.1 3.91e-16   NR HET6303176.1 2818507 g20341 i0 55.3 2.77685950413223 76 34 94.2 0 229 2 122 197 HET6303176.1 crotonase/enoyl-CoA hydratase family protein [Myxococcota bacterium] diamond 672 80.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27135317 27135317 PRJNA1198392_P_NODE_17122_length_249_cov_0.875000_g16981_i0 PRJNA1198392 17122 249 0.875 2.17875 Myxococcota bacterium 2818507 Bacteria Bacteria 87 9.62e-18   NR MEM9865836.1 2818507 g16981 i0 58.1 0.891566265060241 74 30 89.2 1 27 248 201 273 MEM9865836.1 RNA-binding protein [Myxococcota bacterium] diamond 222 87 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27217639 27217639 PRJNA1198392_P_NODE_21042_length_241_cov_1.785714_g20901_i0 PRJNA1198392 21042 241 1.785714 4.30357074 Pseudomonadati 3379134 Bacteria Bacteria 45.4 0.00366   NR MBS2023511.1 2026735 g20901 i0 42.2 2.83817427385892 45 25 56 1 239 105 246 289 MBS2023511.1 metal-dependent hydrolase [Deltaproteobacteria bacterium] diamond 684 45.8 0.991266375545852 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27704701 27704701 PRJNA1198392_P_NODE_8264_length_290_cov_1.419355_g8123_i0 PRJNA1198392 8264 290 1.419355 4.1161295 Labilithrix sp. 1971228 Bacteria Bacteria 78.2 1.38e-14   NR HSO31379.1 1971228 g8123 i0 52.6 1.97586206896552 97 38 95.2 4 289 14 192 285 HSO31379.1 serine/threonine-protein kinase [Labilithrix sp.] diamond 573 78.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
28714784 28714784 PRJNA1198392_P_NODE_8507_length_289_cov_1.425926_g8366_i0 PRJNA1198392 8507 289 1.425926 4.12092614 Polyangiaceae bacterium 2268199 Bacteria Bacteria 69.7 1.58e-11   NR MEO8800990.1 2268199 g8366 i0 60.5 1.39100346020761 43 16 43.6 1 275 150 301 343 MEO8800990.1 PHB depolymerase family esterase [Polyangiaceae bacterium] diamond 402 69.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30167139 30167139 PRJNA1198392_P_NODE_17552_length_248_cov_0.880000_g17411_i0 PRJNA1198392 17552 248 0.88 2.1824 Polyangiaceae bacterium 2268199 Bacteria Bacteria 83.6 2.92e-17   NR MCU0693776.1 2268199 g17411 i0 69.6 1.33064516129032 56 17 67.7 0 79 246 1 56 MCU0693776.1 SDR family NAD(P)-dependent oxidoreductase [Polyangiaceae bacterium] diamond 330 83.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32222265 32222265 PRJNA1198392_P_NODE_11498_length_275_cov_1.475248_g11357_i0 PRJNA1198392 11498 275 1.475248 4.056932 Polyangiaceae bacterium 2268199 Bacteria Bacteria 129 1.4999999999999995e-32   NR MEO7109371.1 2268199 g11357 i0 65.9 0.992727272727273 91 30 99.3 1 1 273 404 493 MEO7109371.1 sulfatase-like hydrolase/transferase [Polyangiaceae bacterium] diamond 273 129 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32632993 32632993 PRJNA1198392_P_NODE_12920_length_268_cov_1.256410_g12779_i0 PRJNA1198392 12920 268 1.25641 3.3671788 Myxococcales bacterium 2026763 Bacteria Bacteria 49.7 1.63e-4   NR MCA9623104.1 2026763 g12779 i0 38 0.794776119402985 71 44 79.5 0 266 54 213 283 MCA9623104.1 hypothetical protein [Myxococcales bacterium] diamond 213 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;