RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1198392" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1198392 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23276719 23276719 PRJNA1198392_P_NODE_15719_length_251_cov_0.865169_g15578_i0 PRJNA1198392 15719 251 0.865169 2.17157419 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 377 3.2999999999999995e-100   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g15578 i0 93.976 237.93625498008 249 15 99 0 1 249 1249522 1249274 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 59722 377 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
29093760 29093760 PRJNA1198392_P_NODE_20708_length_242_cov_0.911243_g20567_i0 PRJNA1198392 20708 242 0.911243 2.20520806 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 63.9 7.89e-10   NR RKW23767.1 2044595 g20567 i0 94.1 0.421487603305785 34 2 42.1 0 106 5 1 34 RKW23767.1 MAG: bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase [Candidatus Altimarinota bacterium] diamond 102 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31228697 31228697 PRJNA1198392_P_NODE_13595_length_264_cov_1.581152_g13454_i0 PRJNA1198392 13595 264 1.581152 4.17424128 Bacteria 2 Bacteria Bacteria 85.9 3.21e-17   NR RAL55812.1 1912928 g13454 i0 95.5 1 44 2 50 0 72 203 502 545 RAL55812.1 hypothetical protein BLD25_04045 [Candidatus Gracilibacteria bacterium GN02-872] diamond 264 86.3 0.995365005793743 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872
31304785 31304785 PRJNA1198392_P_NODE_8315_length_290_cov_1.331797_g8174_i0 PRJNA1198392 8315 290 1.331797 3.8622113 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 60.8 2.08e-8   NR RAL57531.1 1912928 g8174 i0 100 0.3 29 0 30 0 125 211 156 184 RAL57531.1 hypothetical protein BLD25_02650 [Candidatus Gracilibacteria bacterium GN02-872] diamond 87 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;