RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1198392", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1198392 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7421633 7421633 PRJNA1198392_P_NODE_10266_length_281_cov_1.480769_g10125_i0 PRJNA1198392 10266 281 1.480769 4.16096089 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 167 2.42e-46   NR WP_299080220.1 1678694 g10125 i0 96.7 0.97153024911032 91 3 97.2 0 281 9 601 691 WP_299080220.1 heavy metal translocating P-type ATPase [uncultured Fretibacterium sp.] diamond 273 167 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
15627523 15627523 PRJNA1198392_P_NODE_5873_length_332_cov_3.563707_g5732_i0 PRJNA1198392 5873 332 3.563707 11.83150724 Fretibacterium fastidiosum 651822 Bacteria Bacteria 198 3.8e-46   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g5732 i0 93.284 63.2590361445783 134 9 97 0 184 317 69613 69746 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 21002 198 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;