contig_metadata
7 rows where bioproject = "PRJNA1198392", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9252628 | 9252628 | PRJNA1198392_P_NODE_2888_length_441_cov_2.334239_g2747_i0 | PRJNA1198392 | 2888 | 441 | 2.334239 | 10.29399399 | Abditibacteriota bacterium | 2783868 | Bacteria | Bacteria | 496 | 1.6399999999999998e-135 | NTclustered | gi|2215576334|dbj|AP024152.1| | 2783868 | g2747 | i0 | 88.462 | 90.5056689342404 | 416 | 41 | 93 | 5 | 31 | 439 | 2852152 | 2851737 | Abditibacteriota bacterium IAD-21 DNA, complete genome | blastn | 39913 | 496 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriota bacterium | ||||||
| 15627470 | 15627470 | PRJNA1198392_P_NODE_3333_length_416_cov_1.586006_g3192_i0 | PRJNA1198392 | 3333 | 416 | 1.586006 | 6.59778496 | Abditibacteriota bacterium | 2783868 | Bacteria | Bacteria | 366 | 1.2599999999999995e-96 | NTclustered | gi|2215576334|dbj|AP024152.1| | 2783868 | g3192 | i0 | 83.135 | 107.043269230769 | 421 | 51 | 99 | 15 | 3 | 416 | 2850842 | 2851249 | Abditibacteriota bacterium IAD-21 DNA, complete genome | blastn | 44530 | 366 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriota bacterium | ||||||
| 20726156 | 20726156 | PRJNA1198392_P_NODE_8817_length_288_cov_1.176744_g8676_i0 | PRJNA1198392 | 8817 | 288 | 1.176744 | 3.38902272 | Abditibacteriaceae bacterium | 2800791 | Bacteria | Bacteria | 123 | 7.239999999999999e-32 | NR | HEX8234374.1 | 2800791 | g8676 | i0 | 68.4 | 0.989583333333333 | 95 | 26 | 99 | 1 | 3 | 287 | 110 | 200 | HEX8234374.1 diaminopimelate epimerase [Abditibacteriaceae bacterium] | diamond | 285 | 123 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriia | Abditibacteriales | Abditibacteriaceae | Abditibacteriaceae bacterium | |||
| 26723878 | 26723878 | PRJNA1198392_P_NODE_18641_length_246_cov_0.890173_g18500_i0 | PRJNA1198392 | 18641 | 246 | 0.890173 | 2.18982558 | Abditibacteriaceae bacterium | 2800791 | Bacteria | Bacteria | 49.3 | 1.88e-4 | NR | HEX8235082.1 | 2800791 | g18500 | i0 | 41.1 | 0.682926829268293 | 56 | 33 | 68.3 | 0 | 170 | 3 | 545 | 600 | HEX8235082.1 hypothetical protein [Abditibacteriaceae bacterium] | diamond | 168 | 49.3 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriia | Abditibacteriales | Abditibacteriaceae | Abditibacteriaceae bacterium | |||
| 27072471 | 27072471 | PRJNA1198392_P_NODE_11982_length_272_cov_2.070352_g11841_i0 | PRJNA1198392 | 11982 | 272 | 2.070352 | 5.63135744 | Abditibacteriaceae bacterium | 2800791 | Bacteria | Bacteria | 72.4 | 1.75e-12 | NR | HEY0072877.1 | 2800791 | g11841 | i0 | 62.9 | 2.05147058823529 | 62 | 23 | 68.4 | 0 | 6 | 191 | 343 | 404 | HEY0072877.1 gephyrin-like molybdotransferase Glp [Abditibacteriaceae bacterium] | diamond | 558 | 72.4 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriia | Abditibacteriales | Abditibacteriaceae | Abditibacteriaceae bacterium | |||
| 27956977 | 27956977 | PRJNA1198392_P_NODE_11985_length_272_cov_2.015075_g11844_i0 | PRJNA1198392 | 11985 | 272 | 2.015075 | 5.481004 | Abditibacteriaceae bacterium | 2800791 | Bacteria | Bacteria | 129 | 1.2e-33 | NR | HEX8237184.1 | 2800791 | g11844 | i0 | 69.7 | 2.94485294117647 | 89 | 27 | 98.2 | 0 | 271 | 5 | 136 | 224 | HEX8237184.1 phosphoglycolate/pyridoxal phosphate family phosphatase [Abditibacteriaceae bacterium] | diamond | 801 | 129 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriia | Abditibacteriales | Abditibacteriaceae | Abditibacteriaceae bacterium | |||
| 31463200 | 31463200 | PRJNA1198392_P_NODE_20236_length_243_cov_0.905882_g20095_i0 | PRJNA1198392 | 20236 | 243 | 0.905882 | 2.20129326 | Abditibacteriaceae bacterium | 2800791 | Bacteria | Bacteria | 125 | 1.5899999999999998e-31 | NR | HEX8235936.1 | 2800791 | g20095 | i0 | 71.6 | 1 | 81 | 22 | 98.8 | 1 | 242 | 3 | 251 | 331 | HEX8235936.1 ABC transporter substrate-binding protein [Abditibacteriaceae bacterium] | diamond | 243 | 125 | 1 | Bacteria | Pseudomonadati | Abditibacteriota | Abditibacteriia | Abditibacteriales | Abditibacteriaceae | Abditibacteriaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;