RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1198392", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1198392 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26945865 26945865 PRJNA1198392_P_NODE_8482_length_289_cov_1.425926_g8341_i0 PRJNA1198392 8482 289 1.425926 4.12092614 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 2.13e-30   NR MEI7575560.1 2033014 g8341 i0 83.3 1.37024221453287 66 11 68.5 0 3 200 95 160 MEI7575560.1 MBL fold metallo-hydrolase [Armatimonadota bacterium] diamond 396 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32601792 32601792 PRJNA1198392_P_NODE_21900_length_226_cov_2.222222_g21759_i0 PRJNA1198392 21900 226 2.222222 5.02222172 Armatimonadia bacterium 2663015 Bacteria Bacteria 62.4 3.4e-9   NR MEN6404115.1 2663015 g21759 i0 41.7 0.955752212389381 72 42 95.6 0 9 224 498 569 MEN6404115.1 hypothetical protein [Armatimonadia bacterium] diamond 216 62.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;