RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1198392", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1198392 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7978123 7978123 PRJNA1198392_P_NODE_5987_length_330_cov_1.194553_g5846_i0 PRJNA1198392 5987 330 1.194553 3.9420249 Proschkinia sp. SZCZR1824 2588390 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.43e-10   NTclustered gi|1681061561|gb|MH800316.1| 2588390 g5846 i0 76.433 2.10606060606061 157 31 47 6 57 211 4566 4414 Proschkinia sp. SZCZR1824 mitochondrion, complete genome blastn 695 80.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Proschkiniaceae Proschkinia Proschkinia sp. SZCZR1824
26787840 26787840 PRJNA1198392_P_NODE_18361_length_246_cov_1.780347_g18220_i0 PRJNA1198392 18361 246 1.780347 4.37965362 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.18e-5   NR CAB9508486.1 568900 g18220 i0 35.4 1 82 49 100 1 1 246 948 1025 CAB9508486.1 Transitional endoplasmic reticulum ATPase [Seminavis robusta] diamond 246 52.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
28133876 28133876 PRJNA1198392_P_NODE_9445_length_285_cov_1.372642_g9304_i0 PRJNA1198392 9445 285 1.372642 3.9120297 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 122 8.189999999999998e-30   NR CAJ1936289.1 2856 g9304 i0 73.7 10.0421052631579 95 21 98.9 3 284 3 483 574 CAJ1936289.1 unnamed protein product [Cylindrotheca closterium] diamond 2862 123 0.991869918699187 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;