RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1198392", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1198392 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1599306 1599306 PRJNA1198392_P_NODE_2082_length_512_cov_1.753986_g1941_i0 PRJNA1198392 2082 512 1.753986 8.98040832 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 324 9.62e-84   NTclustered gi|669195261|ref|XM_008624420.1| 54757 g1941 i0 78.947 81.607421875 494 90 95 13 26 512 1131 645 Plasmodium vinckei vinckei actin II, putative (PVVCY_1406140), partial mRNA blastn 41783 324 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
31810954 31810954 PRJNA1198392_P_NODE_11237_length_276_cov_1.517241_g11096_i0 PRJNA1198392 11237 276 1.517241 4.18758516 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 56.2 9.42e-7   NR XP_028865362.1 189622 g11096 i0 71.4 0.380434782608696 35 9 37 1 274 173 217 251 XP_028865362.1 cell cycle regulator with zn-finger domain-containing protein [Babesia ovata] diamond 105 56.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;