contig_metadata
20 rows where bioproject = "PRJNA1198392", tax_clade = "PVC group" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324600 | 324600 | PRJNA1198392_P_NODE_19921_length_244_cov_0.859649_g19780_i0 | PRJNA1198392 | 19921 | 244 | 0.859649 | 2.09754356 | Phycisphaerae | 666505 | Bacteria | Bacteria | 76.3 | 5.85e-14 | NR | UCD76450.1 | 2052180 | g19780 | i0 | 84.1 | 1.63524590163934 | 44 | 7 | 54.1 | 0 | 1 | 132 | 464 | 507 | UCD76450.1 MAG: sugar ABC transporter ATP-binding protein [Phycisphaerales bacterium] | diamond | 399 | 76.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 4151589 | 4151589 | PRJNA1198392_P_NODE_21164_length_241_cov_0.916667_g21023_i0 | PRJNA1198392 | 21164 | 241 | 0.916667 | 2.20916747 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 350 | 6.87e-92 | NTclustered | gi|159234363|emb|AM902605.1| | 120965 | g21023 | i0 | 92.946 | 99.5145228215768 | 241 | 16 | 100 | 1 | 1 | 241 | 1445 | 1206 | Uncultured planctomycete partial 16S rRNA gene, isolate OTU37/APA | blastn | 23983 | 350 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 11802957 | 11802957 | PRJNA1198392_P_NODE_11770_length_273_cov_3.270000_g11629_i0 | PRJNA1198392 | 11770 | 273 | 3.27 | 8.9271 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 311 | 3.75e-80 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g11629 | i0 | 87.226 | 131.608058608059 | 274 | 33 | 100 | 2 | 1 | 273 | 1156951 | 1157223 | Planctomyces sp. SH-PL62, complete genome | blastn | 35929 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 13078063 | 13078063 | PRJNA1198392_P_NODE_12851_length_268_cov_1.579487_g12710_i0 | PRJNA1198392 | 12851 | 268 | 1.579487 | 4.23302516 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 65.5 | 5.09e-10 | NR | HEV2296228.1 | 2876886 | g12710 | i0 | 75.6 | 0.458955223880597 | 41 | 10 | 45.9 | 0 | 267 | 145 | 670 | 710 | HEV2296228.1 response regulator [Tepidisphaeraceae bacterium] | diamond | 123 | 65.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 14353757 | 14353757 | PRJNA1198392_P_NODE_6172_length_326_cov_0.762846_g6031_i0 | PRJNA1198392 | 6172 | 326 | 0.762846 | 2.48687796 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 414 | 3.39e-111 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g6031 | i0 | 90.221 | 208.631901840491 | 317 | 31 | 97 | 0 | 10 | 326 | 2018501 | 2018817 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 68014 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 16901811 | 16901811 | PRJNA1198392_P_NODE_21154_length_241_cov_0.916667_g21013_i0 | PRJNA1198392 | 21154 | 241 | 0.916667 | 2.20916747 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 263 | 9.21e-66 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g21013 | i0 | 87.045 | 473.394190871369 | 247 | 15 | 96 | 8 | 5 | 235 | 5065267 | 5065512 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 114088 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 18176124 | 18176124 | PRJNA1198392_P_NODE_14155_length_260_cov_3.000000_g14014_i0 | PRJNA1198392 | 14155 | 260 | 3 | 7.8 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 143 | 1.37e-29 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g14014 | i0 | 94.624 | 6.97307692307692 | 93 | 4 | 36 | 1 | 56 | 148 | 4154584 | 4154675 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 1813 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 26660730 | 26660730 | PRJNA1198392_P_NODE_10961_length_278_cov_1.141463_g10820_i0 | PRJNA1198392 | 10961 | 278 | 1.141463 | 3.17326714 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 56.6 | 7.15e-7 | NR | RMD62086.1 | 2026780 | g10820 | i0 | 40.3 | 0.669064748201439 | 62 | 37 | 66.9 | 0 | 277 | 92 | 366 | 427 | RMD62086.1 MAG: hypothetical protein D6824_07215, partial [Planctomycetota bacterium] | diamond | 186 | 56.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 26945866 | 26945866 | PRJNA1198392_P_NODE_9242_length_286_cov_1.272300_g9101_i0 | PRJNA1198392 | 9242 | 286 | 1.2723 | 3.638778 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 48.5 | 1.52e-4 | NR | HEY4951770.1 | 2499141 | g9101 | i0 | 50 | 0.461538461538462 | 44 | 22 | 46.2 | 0 | 90 | 221 | 80 | 123 | HEY4951770.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 132 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27376232 | 27376232 | PRJNA1198392_P_NODE_14863_length_256_cov_1.683060_g14722_i0 | PRJNA1198392 | 14863 | 256 | 1.68306 | 4.3086336 | Chthoniobacter | 295577 | Bacteria | Bacteria | 122 | 5.6399999999999995e-30 | NR | WP_006977497.1 | 191863 | g14722 | i0 | 75.9 | 7.828125 | 83 | 20 | 97.3 | 0 | 6 | 254 | 454 | 536 | WP_006977497.1 ATP-dependent RNA helicase HrpA [Chthoniobacter flavus] | diamond | 2004 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 28556990 | 28556990 | PRJNA1198392_P_NODE_12747_length_268_cov_2.656410_g12606_i0 | PRJNA1198392 | 12747 | 268 | 2.65641 | 7.1191788 | Limisphaerales bacterium | 2052186 | Bacteria | Bacteria | 53.1 | 1.15e-5 | NR | MFN0067579.1 | 2052186 | g12606 | i0 | 45.3 | 0.593283582089552 | 53 | 29 | 59.3 | 0 | 168 | 10 | 600 | 652 | MFN0067579.1 LamG-like jellyroll fold domain-containing protein [Limisphaerales bacterium] | diamond | 159 | 53.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaerales bacterium | |||
| 28746281 | 28746281 | PRJNA1198392_P_NODE_19067_length_245_cov_0.895349_g18926_i0 | PRJNA1198392 | 19067 | 245 | 0.895349 | 2.19360505 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 152 | 1.6799999999999994e-42 | NR | HMP76488.1 | 2212473 | g18926 | i0 | 93.8 | 0.991836734693878 | 81 | 5 | 99.2 | 0 | 243 | 1 | 17 | 97 | HMP76488.1 5-(carboxyamino)imidazole ribonucleotide synthase [Kiritimatiellia bacterium] | diamond | 243 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 28809108 | 28809108 | PRJNA1198392_P_NODE_18588_length_246_cov_0.890173_g18447_i0 | PRJNA1198392 | 18588 | 246 | 0.890173 | 2.18982558 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 133 | 1.7999999999999998e-36 | NR | RYD81718.1 | 2026800 | g18447 | i0 | 80 | 1.96341463414634 | 80 | 16 | 97.6 | 0 | 3 | 242 | 20 | 99 | RYD81718.1 MAG: AI-2E family transporter [Verrucomicrobiaceae bacterium] | diamond | 483 | 133 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 29144385 | 29144385 | PRJNA1198392_P_NODE_8269_length_290_cov_1.419355_g8128_i0 | PRJNA1198392 | 8269 | 290 | 1.419355 | 4.1161295 | Tautonia | 2680020 | Bacteria | Bacteria | 47 | 0.00202 | NR | WP_390622223.1 | 2653855 | g8128 | i0 | 95.2 | 0.651724137931034 | 21 | 1 | 21.7 | 0 | 1 | 63 | 414 | 434 | WP_390622223.1 hypothetical protein [Tautonia marina] | diamond | 189 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia marina | |
| 29598495 | 29598495 | PRJNA1198392_P_NODE_16170_length_250_cov_1.740113_g16029_i0 | PRJNA1198392 | 16170 | 250 | 1.740113 | 4.3502825 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.9 | 0.0159 | NR | RME79982.1 | 2026780 | g16029 | i0 | 37.7 | 0.636 | 53 | 33 | 63.6 | 0 | 204 | 46 | 455 | 507 | RME79982.1 MAG: hypothetical protein D6785_10785 [Planctomycetota bacterium] | diamond | 159 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29914751 | 29914751 | PRJNA1198392_P_NODE_10751_length_279_cov_1.199029_g10610_i0 | PRJNA1198392 | 10751 | 279 | 1.199029 | 3.34529091 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 153 | 2.3499999999999992e-43 | NR | HEV2293406.1 | 2876886 | g10610 | i0 | 76.9 | 0.978494623655914 | 91 | 21 | 97.8 | 0 | 3 | 275 | 176 | 266 | HEV2293406.1 hypothetical protein [Tepidisphaeraceae bacterium] | diamond | 273 | 153 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 31052255 | 31052255 | PRJNA1198392_P_NODE_19355_length_244_cov_3.210526_g19214_i0 | PRJNA1198392 | 19355 | 244 | 3.210526 | 7.83368344 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 92.8 | 7.98e-20 | NR | MDB6032852.1 | 2026801 | g19214 | i0 | 50 | 0.909836065573771 | 74 | 37 | 91 | 0 | 3 | 224 | 66 | 139 | MDB6032852.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 222 | 92.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 31652586 | 31652586 | PRJNA1198392_P_NODE_16677_length_249_cov_3.284091_g16536_i0 | PRJNA1198392 | 16677 | 249 | 3.284091 | 8.17738659 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 51.6 | 2.72e-5 | NR | HEU4679860.1 | 2832348 | g16536 | i0 | 46 | 1.24096385542169 | 50 | 27 | 60.2 | 0 | 160 | 11 | 182 | 231 | HEU4679860.1 hypothetical protein [Terrimicrobiaceae bacterium] | diamond | 309 | 51.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 31874146 | 31874146 | PRJNA1198392_P_NODE_8597_length_289_cov_1.115741_g8456_i0 | PRJNA1198392 | 8597 | 289 | 1.115741 | 3.22449149 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 45.8 | 0.00521 | NR | HSU69413.1 | 2876886 | g8456 | i0 | 34.7 | 2.67820069204152 | 75 | 47 | 77.9 | 1 | 11 | 235 | 50 | 122 | HSU69413.1 FtsX-like permease family protein [Tepidisphaeraceae bacterium] | diamond | 774 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 32000751 | 32000751 | PRJNA1198392_P_NODE_16578_length_250_cov_0.870056_g16437_i0 | PRJNA1198392 | 16578 | 250 | 0.870056 | 2.17514 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 106 | 3.4999999999999997e-25 | NR | MFA5056512.1 | 2006848 | g16437 | i0 | 56.6 | 0.996 | 83 | 36 | 99.6 | 0 | 2 | 250 | 207 | 289 | MFA5056512.1 major capsid protein [Opitutaceae bacterium] | diamond | 249 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;