contig_metadata
5 rows where bioproject = "PRJNA1198392", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9252432 | 9252432 | PRJNA1198392_P_NODE_14068_length_261_cov_1.638298_g13927_i0 | PRJNA1198392 | 14068 | 261 | 1.638298 | 4.27595778 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 320 | 5.91e-83 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g13927 | i0 | 89.231 | 191.915708812261 | 260 | 22 | 99 | 5 | 4 | 261 | 3043615 | 3043360 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 50090 | 320 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 13078065 | 13078065 | PRJNA1198392_P_NODE_12931_length_268_cov_1.184615_g12790_i0 | PRJNA1198392 | 12931 | 268 | 1.184615 | 3.1747682 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 403 | 5.88e-108 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g12790 | i0 | 94.961 | 247.011194029851 | 258 | 12 | 96 | 1 | 1 | 257 | 1904309 | 1904052 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 66199 | 403 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16901809 | 16901809 | PRJNA1198392_P_NODE_21054_length_241_cov_1.672619_g20913_i0 | PRJNA1198392 | 21054 | 241 | 1.672619 | 4.03101179 | uncultured Gemmatimonadota bacterium | 203437 | Bacteria | Bacteria | 326 | 1.16e-84 | NTclustered | gi|451919023|gb|KC452887.1| | 203437 | g20913 | i0 | 91.949 | 98.149377593361 | 236 | 14 | 96 | 4 | 10 | 241 | 79 | 313 | Uncultured Gemmatimonadetes bacterium clone RLBp2779 16S ribosomal RNA gene, partial sequence | blastn | 23654 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | uncultured Gemmatimonadota bacterium | |||||
| 26882847 | 26882847 | PRJNA1198392_P_NODE_13421_length_265_cov_1.604167_g13280_i0 | PRJNA1198392 | 13421 | 265 | 1.604167 | 4.25104255 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 62.8 | 1.22e-10 | NR | HEX7242551.1 | 3047548 | g13280 | i0 | 75 | 0.543396226415094 | 48 | 12 | 54.3 | 0 | 3 | 146 | 37 | 84 | HEX7242551.1 hypothetical protein [Longimicrobiaceae bacterium] | diamond | 144 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 28291448 | 28291448 | PRJNA1198392_P_NODE_7626_length_298_cov_2.773333_g7485_i0 | PRJNA1198392 | 7626 | 298 | 2.773333 | 8.26453234 | Bacteria | 2 | Bacteria | Bacteria | 127 | 2.8099999999999997e-32 | NR | MBI4408192.1 | 2026742 | g7485 | i0 | 61.1 | 3.24161073825503 | 108 | 33 | 99.7 | 2 | 2 | 298 | 165 | 272 | MBI4408192.1 M28 family peptidase [Gemmatimonadota bacterium] | diamond | 966 | 128 | 0.9921875 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;