RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1198392", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1198392 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28683309 28683309 PRJNA1198392_P_NODE_16107_length_251_cov_0.865169_g15966_i0 PRJNA1198392 16107 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 66.2 1.74e-10   NR HXG26622.1 2838779 g15966 i0 48.2 0.99203187250996006 83 38 95.6 2 11 250 8 88 HXG26622.1 permease prefix domain 1-containing protein [Candidatus Binatia bacterium] diamond 249 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31969029 31969029 PRJNA1198392_P_NODE_12998_length_267_cov_1.649485_g12857_i0 PRJNA1198392 12998 267 1.649485 4.40412495 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 46.6 5.68e-4   NR MDC0292438.1 2838779 g12857 i0 32.5 0.898876404494382 80 33 67.4 2 218 39 2 80 MDC0292438.1 hypothetical protein [Candidatus Binatia bacterium] diamond 240 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;