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contig_metadata

11 rows where bioproject = "PRJNA1198392" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA1198392 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6146589 6146589 PRJNA1198392_P_NODE_17985_length_247_cov_0.885057_g17844_i0 PRJNA1198392 17985 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 431 2.45e-116   NTclustered gi|909719645|gb|KT185625.1| 5778 g17844 i0 98.367 35.5789473684211 245 4 99 0 1 245 3562 3806 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 8788 431 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9252448 9252448 PRJNA1198392_P_NODE_14708_length_257_cov_1.673913_g14567_i0 PRJNA1198392 14708 257 1.673913 4.30195641 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 431 2.57e-116   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g14567 i0 96.887 1.45525291828794 257 8 100 0 1 257 679 935 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 374 431 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11803220 11803220 PRJNA1198392_P_NODE_2570_length_464_cov_1.181586_g2429_i0 PRJNA1198392 2570 464 1.181586 5.48255904 Dictyostelium discoideum 44689 Evosea other_Eukaryota 560 6.06e-155   NTclustered gi|66821326|ref|XM_639065.1| 352472 g2429 i0 88.962 95.8383620689655 453 50 98 0 12 464 1131 679 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 44469 560 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
15627317 15627317 PRJNA1198392_P_NODE_15413_length_252_cov_3.284916_g15272_i0 PRJNA1198392 15413 252 3.284916 8.27798832 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 313 9.49e-81   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g15272 i0 92.627 0.861111111111111 217 16 86 0 1 217 4255 4039 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 217 313 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
22001381 22001381 PRJNA1198392_P_NODE_21478_length_241_cov_0.916667_g21337_i0 PRJNA1198392 21478 241 0.916667 2.20916747 Cavenderia fasciculata 261658 Evosea other_Eukaryota 139 7.56e-38   NR XP_004351999.1 261658 g21337 i0 76.3 0.995850622406639 80 19 99.6 0 1 240 250 329 XP_004351999.1 cysteine protease [Cavenderia fasciculata] diamond 240 139 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
27830600 27830600 PRJNA1198392_P_NODE_13204_length_266_cov_1.595855_g13063_i0 PRJNA1198392 13204 266 1.595855 4.2449743 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 149 1.42e-39   NR PRP86705.1 1890364 g13063 i0 73.9 1.98496240601504 88 23 99.2 0 264 1 108 195 PRP86705.1 protein arginine N-methyltransferase 1 [Planoprotostelium fungivorum] diamond 528 149 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28430654 28430654 PRJNA1198392_P_NODE_11206_length_276_cov_2.073892_g11065_i0 PRJNA1198392 11206 276 2.073892 5.72394192 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 94 3.04e-20   NR PRP77394.1 1890364 g11065 i0 49.5 0.989130434782609 91 46 98.9 0 276 4 303 393 PRP77394.1 hypothetical protein PROFUN_14400 [Planoprotostelium fungivorum] diamond 273 94 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29282881 29282881 PRJNA1198392_P_NODE_9909_length_283_cov_1.204762_g9768_i0 PRJNA1198392 9909 283 1.2047620000000001 3.40947646 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 3.97e-24   NR XP_004334918.1 1257118 g9768 i0 62 2.53356890459364 79 30 83.7 0 243 7 726 804 XP_004334918.1 ABC transporter, ATPbinding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 717 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32127519 32127519 PRJNA1198392_P_NODE_16718_length_249_cov_1.750000_g16577_i0 PRJNA1198392 16718 249 1.75 4.3575 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 1.2e-23   NR XP_004368228.1 1257118 g16577 i0 64.9 5.60240963855422 77 27 92.8 0 245 15 220 296 XP_004368228.1 guanine nucleotide-binding protein alpha-5 subunit, putative [Acanthamoeba castellanii str. Neff] diamond 1395 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32727774 32727774 PRJNA1198392_P_NODE_11300_length_276_cov_1.384236_g11159_i0 PRJNA1198392 11300 276 1.384236 3.82049136 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 58.9 1.17e-7   NR PRP77174.1 1890364 g11159 i0 41.7 0.782608695652174 72 38 76.1 2 55 264 1082 1151 PRP77174.1 hypothetical protein PROFUN_14515 [Planoprotostelium fungivorum] diamond 216 58.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32885013 32885013 PRJNA1198392_P_NODE_8340_length_290_cov_1.244240_g8199_i0 PRJNA1198392 8340 290 1.24424 3.608296 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 45.8 0.00546   NR XP_001134537.1 352472 g8199 i0 44 0.868965517241379 84 39 82.8 2 289 50 864 943 XP_001134537.1 I/LWEQ domain-containing protein [Dictyostelium discoideum AX4] diamond 252 45.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;