RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1197996", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1197996 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13797002 13797002 PRJNA1197996_S_NODE_22951_length_253_cov_1.400000_g22897_i0 PRJNA1197996 22951 253 1.4 3.542 Opisthokonta 33154 Fungi Fungi 63.9 1.06e-5   NTclustered gi|2324079080|ref|XM_051524244.1| 90255 g22897 i0 95 4.54545454545455 40 2 16 0 39 78 2576 2615 Cokeromyces recurvatus kinase-like domain-containing protein (BX663DRAFT_475573), mRNA blastn 1150 63.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
27609685 27609685 PRJNA1197996_S_NODE_22004_length_257_cov_1.798913_g21950_i0 PRJNA1197996 22004 257 1.798913 4.62320641 Geosiphon pyriformis 50956 Fungi Fungi 49.3 2.1e-4   NR KAG9290774.1 50956 g21950 i0 41.7 0.560311284046693 48 27 56 1 17 160 387 433 KAG9290774.1 hypothetical protein G9A89_011737 [Geosiphon pyriformis] diamond 144 49.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis
28462342 28462342 PRJNA1197996_S_NODE_16386_length_286_cov_0.948357_g16332_i0 PRJNA1197996 16386 286 0.948357 2.71230102 Rhizopus microsporus 58291 Fungi Fungi 47 0.00171   NR CEI91330.1 58291 g16332 i0 51.6 0.325174825174825 31 15 32.5 0 284 192 85 115 CEI91330.1 hypothetical protein RMCBS344292_05625 [Rhizopus microsporus] diamond 93 47 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;