contig_metadata
8 rows where bioproject = "PRJNA1197996", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1043713 | 1043713 | PRJNA1197996_S_NODE_27101_length_244_cov_0.900585_g27047_i0 | PRJNA1197996 | 27101 | 244 | 0.900585 | 2.1974274 | root | 1 | Root_unresolved | Root_unresolved | 92.8 | 1.85e-22 | NR | RHY30188.1 | 157072 | g27047 | i0 | 65.2 | 1.61065573770492 | 66 | 23 | 81.1 | 0 | 244 | 47 | 19 | 84 | RHY30188.1 hypothetical protein DYB32_004557, partial [Aphanomyces invadans] | diamond | 393 | 93.6 | 0.991452991452991 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 4871784 | 4871784 | PRJNA1197996_S_NODE_364_length_1026_cov_1.997901_g335_i0 | PRJNA1197996 | 364 | 1026 | 1.997901 | 20.49846426 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 1677 | 0 | NTclustered | gi|2248512796|ref|NC_063789.1| | 272952 | g335 | i0 | 96.819 | 98.0672514619883 | 1006 | 28 | 98 | 2 | 1 | 1002 | 1028 | 23 | Hyaloperonospora arabidopsidis isolate Noks1 mitochondrion, complete genome | blastn | 100617 | 1681 | 0.997620464009518 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora arabidopsidis | ||
| 7421453 | 7421453 | PRJNA1197996_S_NODE_10246_length_332_cov_1.509653_g10192_i0 | PRJNA1197996 | 10246 | 332 | 1.509653 | 5.01204796 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 67.6 | 1.12e-6 | NTclustered | gi|2795039260|ref|XM_067938436.1| | 4785 | g10192 | i0 | 88.889 | 0.487951807228916 | 54 | 6 | 16 | 0 | 277 | 330 | 1719 | 1666 | Phytophthora cinnamomi Translocation protein SEC63 (IUM83_13740), partial mRNA | blastn | 162 | 67.6 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 11802490 | 11802490 | PRJNA1197996_S_NODE_19190_length_270_cov_3.111675_g19136_i0 | PRJNA1197996 | 19190 | 270 | 3.111675 | 8.4015225 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 285 | 2.24e-72 | NTclustered | gi|2795032738|ref|XM_067933181.1| | 4785 | g19136 | i0 | 87.967 | 93.1518518518518 | 241 | 29 | 89 | 0 | 1 | 241 | 751 | 991 | Phytophthora cinnamomi Electron transfer flavoprotein subunit alpha, mitochondrial precursor (IUM83_08787), partial mRNA | blastn | 25151 | 285 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 22000618 | 22000618 | PRJNA1197996_S_NODE_15258_length_292_cov_2.310502_g15204_i0 | PRJNA1197996 | 15258 | 292 | 2.310502 | 6.74666584 | Peronospora aff. claytoniae | 2028483 | SAR_Eukaryotes | SAR_Eukaryotes | 464 | 2.93e-126 | NTclustered | gi|1235732001|gb|MF693904.1| | 2028483 | g15204 | i0 | 98.846 | 88.8664383561644 | 260 | 3 | 89 | 0 | 32 | 291 | 1 | 260 | Peronospora aff. claytoniae isolate RC16DM3 large subunit ribosomal RNA gene, partial sequence | blastn | 25949 | 464 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Peronospora | Peronospora aff. claytoniae | ||
| 28398967 | 28398967 | PRJNA1197996_S_NODE_2586_length_513_cov_6.104545_g2535_i0 | PRJNA1197996 | 2586 | 513 | 6.104545 | 31.31631585 | Pythium oligandrum | 41045 | SAR_Eukaryotes | SAR_Eukaryotes | 84.3 | 1.62e-15 | NR | TMW68720.1 | 41045 | g2535 | i0 | 37.8 | 0.573099415204678 | 98 | 61 | 57.3 | 0 | 3 | 296 | 57 | 154 | TMW68720.1 hypothetical protein Poli38472_006188 [Pythium oligandrum] | diamond | 294 | 84.3 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 29282874 | 29282874 | PRJNA1197996_S_NODE_8809_length_348_cov_1.676364_g8755_i0 | PRJNA1197996 | 8809 | 348 | 1.676364 | 5.83374672 | Saprolegnia parasitica CBS 223.65 | 695850 | SAR_Eukaryotes | SAR_Eukaryotes | 46.2 | 0.00743 | NR | XP_012194493.1 | 695850 | g8755 | i0 | 51.2 | 0.706896551724138 | 41 | 20 | 35.3 | 0 | 3 | 125 | 803 | 843 | XP_012194493.1 CMGC/MAPK protein kinase [Saprolegnia parasitica CBS 223.65] | diamond | 246 | 46.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 31652576 | 31652576 | PRJNA1197996_S_NODE_20657_length_263_cov_2.915789_g20603_i0 | PRJNA1197996 | 20657 | 263 | 2.915789 | 7.66852507 | Lagenidium giganteum | 4803 | SAR_Eukaryotes | SAR_Eukaryotes | 60.5 | 2.8e-8 | NR | DAZ94709.1 | 4803 | g20603 | i0 | 42 | 5.85171102661597 | 69 | 39 | 77.6 | 1 | 206 | 3 | 672 | 740 | DAZ94709.1 TPA: hypothetical protein N0F65_012662 [Lagenidium giganteum] | diamond | 1539 | 60.5 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium giganteum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;