contig_metadata
7 rows where bioproject = "PRJNA1197996", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6146496 | 6146496 | PRJNA1197996_S_NODE_27365_length_243_cov_1.358824_g27311_i0 | PRJNA1197996 | 27365 | 243 | 1.358824 | 3.30194232 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 52.8 | 0.022 | NTclustered | gi|1376152721|ref|XM_024644931.1| | 34506 | g27311 | i0 | 100 | 0.345679012345679 | 28 | 0 | 12 | 0 | 99 | 126 | 581 | 608 | Strongyloides ratti Paired domain and Homeodomain-like and Winged helix-turn-helix DNA-binding domain-containing protein (SRAE_X000057000), partial mRNA | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 22000864 | 22000864 | PRJNA1197996_S_NODE_25958_length_246_cov_0.890173_g25904_i0 | PRJNA1197996 | 25958 | 246 | 0.890173 | 2.18982558 | Metazoa | 33208 | Nematoda | Nematoda | 167 | 7.47e-50 | NR | XP_003369644.1 | 6334 | g25904 | i0 | 98.8 | 109.646341463415 | 81 | 1 | 98.8 | 0 | 2 | 244 | 18 | 98 | XP_003369644.1 GTP-binding ADP-ribosylation factor [Trichinella spiralis] | diamond | 26973 | 168 | 0.994047619047619 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella spiralis | |
| 24550004 | 24550004 | PRJNA1197996_S_NODE_13800_length_302_cov_1.397380_g13746_i0 | PRJNA1197996 | 13800 | 302 | 1.39738 | 4.2200876 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 213 | 1.22e-50 | NTclustered | gi|1376144029|ref|XM_024652443.1| | 34506 | g13746 | i0 | 79.47 | 44.6523178807947 | 302 | 60 | 99 | 2 | 1 | 301 | 185 | 485 | Strongyloides ratti Tubulin beta-2A chain (SRAE_2000148500), partial mRNA | blastn | 13485 | 213 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 27786578 | 27786578 | PRJNA1197996_S_NODE_17104_length_281_cov_5.658654_g17050_i0 | PRJNA1197996 | 17104 | 281 | 5.658654 | 15.90081774 | Metazoa | 33208 | Nematoda | Nematoda | 82.4 | 5.31e-16 | NR | NP_001379805.1 | 6239 | g17050 | i0 | 86.4 | 9.86476868327402 | 44 | 6 | 47 | 0 | 19 | 150 | 377 | 420 | NP_001379805.1 Aldehyde dehydrogenase domain-containing protein [Caenorhabditis elegans] | diamond | 2772 | 82.8 | 0.995169082125604 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 29062167 | 29062167 | PRJNA1197996_S_NODE_4908_length_416_cov_6.195335_g4854_i0 | PRJNA1197996 | 4908 | 416 | 6.195335 | 25.7725936 | Onchocerca flexuosa | 387005 | Nematoda | Nematoda | 45.1 | 0.011 | NR | OZC05557.1 | 387005 | g4854 | i0 | 34.4 | 0.439903846153846 | 61 | 36 | 41.1 | 2 | 60 | 230 | 41 | 101 | OZC05557.1 hypothetical protein X798_07469, partial [Onchocerca flexuosa] | diamond | 183 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Onchocerca | Onchocerca flexuosa | |
| 30009512 | 30009512 | PRJNA1197996_S_NODE_25011_length_248_cov_0.880000_g24957_i0 | PRJNA1197996 | 25011 | 248 | 0.88 | 2.1824 | Diploscapter pachys | 2018661 | Nematoda | Nematoda | 59.7 | 4.22e-8 | NR | PAV62583.1 | 2018661 | g24957 | i0 | 51.3 | 0.943548387096774 | 39 | 19 | 47.2 | 0 | 237 | 121 | 374 | 412 | PAV62583.1 hypothetical protein WR25_19835 [Diploscapter pachys] | diamond | 234 | 59.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Diploscapter | Diploscapter pachys | |
| 30799083 | 30799083 | PRJNA1197996_S_NODE_6834_length_376_cov_2.749175_g6780_i0 | PRJNA1197996 | 6834 | 376 | 2.749175 | 10.336898 | Cylicocyclus nassatus | 53992 | Nematoda | Nematoda | 50.4 | 3.07e-4 | NR | CAJ0601705.1 | 53992 | g6780 | i0 | 62.2 | 1.01329787234043 | 37 | 14 | 29.5 | 0 | 56 | 166 | 396 | 432 | CAJ0601705.1 unnamed protein product [Cylicocyclus nassatus] | diamond | 381 | 50.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongylidae | Cylicocyclus | Cylicocyclus nassatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;