RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1196438" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1196438 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2874419 2874419 PRJNA1196438_P_NODE_80843_length_232_cov_2.647799_g80416_i0 PRJNA1196438 80843 232 2.647799 6.14289368 Percavirus equidgamma2 3050281 Viruses Viruses 372 1.3999999999999998e-98   NTclustered gi|2271301500|gb|MW322569.1| 12657 g80416 i0 95.671 22.9094827586207 231 10 99 0 1 231 104041 104271 Equid gammaherpesvirus 2 strain 1-141/67, complete genome blastn 5315 372 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus equidgamma2
6700790 6700790 PRJNA1196438_P_NODE_16986_length_312_cov_3.569038_g16560_i0 PRJNA1196438 16986 312 3.569038 11.13539856 Cyvirus cyprinidallo1 3050269 Viruses Viruses 56.5 0.002   NTclustered gi|422933554|ref|NC_019491.1| 317858 g16560 i0 97.059 0.310897435897436 34 0 11 1 119 151 29421 29454 Cyprinid herpesvirus 1 strain NG-J1, complete genome blastn 97 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Alloherpesviridae Cyvirus Cyvirus cyprinidallo1
22720251 22720251 PRJNA1196438_P_NODE_56238_length_263_cov_13.468421_g55811_i0 PRJNA1196438 56238 263 13.468421 35.42194723 root 1 Root_unresolved Root_unresolved 191 4.88e-44   NTclustered gi|530527584|gb|KF493877.1| 10359 g55811 i0 89.404 57.3916349809886 151 16 57 0 3 153 2284 2434 Human herpesvirus 5 transgenic isolate Towne-BAC-der, complete genome blastn 15094 191 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;