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contig_metadata

25 rows where bioproject = "PRJNA1196438" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1196438 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6701509 6701509 PRJNA1196438_P_NODE_79866_length_234_cov_2.869565_g79439_i0 PRJNA1196438 79866 234 2.869565 6.7147821 Betapapillomavirus 1 337051 Viruses Viruses 431 2.3e-116   NTclustered gi|1200175664|gb|KY969593.1| 31547 g79439 i0 100 5.4017094017094 233 0 99 0 2 234 7512 7280 Human papillomavirus 20 strain HPV-20/Lancaster/2015, complete genome blastn 1264 431 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
13076998 13076998 PRJNA1196438_P_NODE_63451_length_253_cov_2.177778_g63024_i0 PRJNA1196438 63451 253 2.177778 5.50977834 Betapolyomavirus macacae 1891767 Viruses Viruses 152 2.1999999999999994e-32   NTclustered gi|156598992|gb|EF579658.1| 1891767 g63024 i0 80.882 0.806324110671937 204 30 81 5 1 204 2491 2685 Simian virus 40 isolate SV40(Ad)191, complete genome blastn 204 152 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
20724722 20724722 PRJNA1196438_P_NODE_61877_length_255_cov_2.714286_g61450_i0 PRJNA1196438 61877 255 2.714286 6.9214293 Alphapolyomavirus quintihominis 1891726 Viruses Viruses 472 1.5e-128   NTclustered gi|293595984|gb|HM011552.1| 493803 g61450 i0 100 100 255 0 100 0 1 255 1655 1909 Merkel cell polyomavirus isolate 25b, complete genome blastn 25500 472 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
22720109 22720109 PRJNA1196438_P_NODE_27198_length_301_cov_4.614035_g26772_i0 PRJNA1196438 27198 301 4.614035 13.88824535 Gammapapillomavirus 325455 Viruses Viruses 279 1.18e-70   NTclustered gi|1559669533|gb|MH777373.2| 10566 g26772 i0 100 2.97009966777409 151 0 99 0 2 152 2856 3006 MAG: Human papillomavirus isolate HPV-mSK_234, complete genome blastn 894 279 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
22720364 22720364 PRJNA1196438_P_NODE_84198_length_222_cov_6.302013_g83771_i0 PRJNA1196438 84198 222 6.302013 13.99046886 Betapapillomavirus 333922 Viruses Viruses 411 2.8199999999999996e-110   NTclustered gi|1273499018|gb|MF588680.1| 333924 g83771 i0 100 10.009009009009 222 0 100 0 1 222 748 527 Betapapillomavirus 2 isolate Beta02_LCOSOc207, complete genome blastn 2222 411 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
26755774 26755774 PRJNA1196438_P_NODE_5941_length_410_cov_4.142433_g5521_i0 PRJNA1196438 5941 410 4.142433 16.9839753 Betapolyomavirus macacae 1891767 Viruses Viruses 56.6 3.11e-6   NR AAK29054.1 1891767 g5521 i0 68.2 0.321951219512195 44 14 32.2 0 383 252 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 56.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
27135274 27135274 PRJNA1196438_P_NODE_49142_length_274_cov_3.059701_g48715_i0 PRJNA1196438 49142 274 3.059701 8.38358074 Betapolyomavirus macacae 1891767 Viruses Viruses 53.1 1.17e-5   NR AAK29054.1 1891767 g48715 i0 63.6 0.481751824817518 44 16 48.2 0 198 67 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 53.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
27135298 27135298 PRJNA1196438_P_NODE_8482_length_358_cov_2.771930_g8060_i0 PRJNA1196438 8482 358 2.77193 9.9235094 Betapolyomavirus macacae 1891767 Viruses Viruses 53.1 2.92e-5   NR AAK29054.1 1891767 g8060 i0 65.1 0.360335195530726 43 15 36 0 195 323 495 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 129 53.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
27451939 27451939 PRJNA1196438_P_NODE_61963_length_255_cov_2.401099_g61536_i0 PRJNA1196438 61963 255 2.401099 6.12280245 Betapolyomavirus macacae 1891767 Viruses Viruses 64.7 7.7e-10   NR AAK29054.1 1891767 g61536 i0 72.7 0.517647058823529 44 12 51.8 0 75 206 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 64.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
27988498 27988498 PRJNA1196438_P_NODE_3985_length_490_cov_3.009592_g3571_i0 PRJNA1196438 3985 490 3.009592 14.7470008 Betapolyomavirus macacae 1891767 Viruses Viruses 49.3 0.00211   NR AAK29054.1 1891767 g3571 i0 59.1 0.43469387755102 44 18 26.9 0 383 252 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 213 49.3 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
28304184 28304184 PRJNA1196438_P_NODE_54986_length_265_cov_4.906250_g54559_i0 PRJNA1196438 54986 265 4.90625 13.0015625 Betapolyomavirus macacae 1891767 Viruses Viruses 61.2 1.43e-8   NR AAK29054.1 1891767 g54559 i0 72.7 0.49811320754717 44 12 49.8 0 164 33 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 61.2 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
28777678 28777678 PRJNA1196438_P_NODE_10267_length_330_cov_6.066148_g9842_i0 PRJNA1196438 10267 330 6.066148 20.0182884 Betapolyomavirus macacae 1891767 Viruses Viruses 51.2 1.07e-4   NR AAK29054.1 1891767 g9842 i0 65.9 0.372727272727273 41 14 37.3 0 196 318 495 535 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 123 51.2 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
29629942 29629942 PRJNA1196438_P_NODE_62250_length_255_cov_1.527473_g61823_i0 PRJNA1196438 62250 255 1.527473 3.89505615 Betapolyomavirus macacae 1891767 Viruses Viruses 52 2.39e-5   NR AAK29054.1 1891767 g61823 i0 60.5 0.505882352941176 43 17 50.6 0 49 177 495 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 129 52 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
29743726 29743726 PRJNA1196438_P_NODE_24030_length_311_cov_7.831933_g23604_i0 PRJNA1196438 24030 311 7.831933 24.35731163 root 1 Root_unresolved Root_unresolved 49.7 4.04e-5   NR AAD55993.1 1891767 g23604 i0 50 1.76527331189711 52 24 48.2 1 54 203 52 103 AAD55993.1 large T antigen, partial [Betapolyomavirus macacae] diamond 549 49.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
29946249 29946249 PRJNA1196438_P_NODE_9451_length_342_cov_6.297398_g7630_i1 PRJNA1196438 9451 342 6.297398 21.53710116 Betapolyomavirus macacae 1891767 Viruses Viruses 59.7 1.26e-7   NR AAK29054.1 1891767 g7630 i1 75 0.350877192982456 40 10 35.1 0 133 14 498 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 120 59.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30009490 30009490 PRJNA1196438_P_NODE_7631_length_373_cov_4.646667_g7209_i0 PRJNA1196438 7631 373 4.646667 17.33206791 Betapolyomavirus macacae 1891767 Viruses Viruses 54.7 1.02e-5   NR AAK29054.1 1891767 g7209 i0 60.5 0.345844504021448 43 17 34.6 0 142 14 495 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 129 54.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30198633 30198633 PRJNA1196438_P_NODE_48552_length_275_cov_2.861386_g48125_i0 PRJNA1196438 48552 275 2.861386 7.8688115 Betapolyomavirus macacae 1891767 Viruses Viruses 57.4 3.77e-7   NR AAK29054.1 1891767 g48125 i0 67.4 0.469090909090909 43 14 46.9 0 166 38 495 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 129 57.4 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30483262 30483262 PRJNA1196438_P_NODE_42113_length_285_cov_4.202830_g41686_i0 PRJNA1196438 42113 285 4.20283 11.9780655 Betapolyomavirus macacae 1891767 Viruses Viruses 43.5 0.032   NR AAK29054.1 1891767 g41686 i0 74.2 0.326315789473684 31 8 32.6 0 98 190 507 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 93 43.5 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30502184 30502184 PRJNA1196438_P_NODE_72453_length_245_cov_1.750000_g72026_i0 PRJNA1196438 72453 245 1.75 4.2875 root 1 Root_unresolved Root_unresolved 54.3 3.09e-7   NR AAD55993.1 1891767 g72026 i0 57.5 1.86122448979592 40 17 49 0 198 79 63 102 AAD55993.1 large T antigen, partial [Betapolyomavirus macacae] diamond 456 54.3 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30672679 30672679 PRJNA1196438_P_NODE_70873_length_246_cov_3.312139_g70446_i0 PRJNA1196438 70873 246 3.312139 8.14786194 Betapolyomavirus macacae 1891767 Viruses Viruses 57 3.54e-7   NR AAK29054.1 1891767 g70446 i0 65.1 0.524390243902439 43 15 52.4 0 83 211 495 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 129 57 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30925822 30925822 PRJNA1196438_P_NODE_8294_length_361_cov_2.736111_g7872_i0 PRJNA1196438 8294 361 2.736111 9.87736071 Betapolyomavirus macacae 1891767 Viruses Viruses 59.7 1.59e-7   NR AAK29054.1 1891767 g7872 i0 72.7 0.365650969529086 44 12 36.6 0 355 224 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 59.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
31494728 31494728 PRJNA1196438_P_NODE_46416_length_279_cov_1.208738_g45989_i0 PRJNA1196438 46416 279 1.208738 3.37237902 Betapolyomavirus macacae 1891767 Viruses Viruses 56.6 7.31e-7   NR AAK29054.1 1891767 g45989 i0 63.6 0.473118279569892 44 16 47.3 0 122 253 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 56.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
31558044 31558044 PRJNA1196438_P_NODE_25936_length_302_cov_12.458515_g25510_i0 PRJNA1196438 25936 302 12.458515 37.6247153 Betapolyomavirus macacae 1891767 Viruses Viruses 47 1.39e-4   NR AAF28272.1 1891767 g25510 i0 81.5 0.268211920529801 27 5 26.8 0 225 145 28 54 AAF28272.1 large t antigen, partial [Betapolyomavirus macacae] diamond 81 47 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32063901 32063901 PRJNA1196438_P_NODE_61778_length_255_cov_3.362637_g61351_i0 PRJNA1196438 61778 255 3.362637 8.57472435 Betapolyomavirus macacae 1891767 Viruses Viruses 53.9 4.83e-6   NR AAK29054.1 1891767 g61351 i0 68.2 0.517647058823529 44 14 51.8 0 205 74 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 53.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32190637 32190637 PRJNA1196438_P_NODE_55558_length_265_cov_1.369792_g55131_i0 PRJNA1196438 55558 265 1.369792 3.6299488 Betapolyomavirus macacae 1891767 Viruses Viruses 62.4 5.84e-9   NR AAK29054.1 1891767 g55131 i0 75.6 0.464150943396226 41 10 46.4 0 91 213 495 535 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 123 62.4 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;