contig_metadata
10 rows where bioproject = "PRJNA1196438" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1597986 | 1597986 | PRJNA1196438_P_NODE_60662_length_257_cov_2.239130_g60235_i0 | PRJNA1196438 | 60662 | 257 | 2.23913 | 5.7545641 | Candidatus Piscichlamydia sp. | 1977145 | Bacteria | Bacteria | 436 | 5.52e-118 | NTclustered | gi|1175896721|gb|KY380088.1| | 1977145 | g60235 | i0 | 98.776 | 95.8287937743191 | 245 | 3 | 95 | 0 | 13 | 257 | 403 | 647 | Candidatus Piscichlamydia sp. strain EP 16S ribosomal RNA gene, partial sequence | blastn | 24628 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Piscichlamydiaceae | Candidatus Piscichlamydia | Candidatus Piscichlamydia sp. | |
| 3593878 | 3593878 | PRJNA1196438_P_NODE_67983_length_249_cov_1.750000_g67556_i0 | PRJNA1196438 | 67983 | 249 | 1.75 | 4.3575 | PVC group | 1783257 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|337292513|emb|FR872621.1| | 765953 | g67556 | i0 | 100 | 60.9718875502008 | 249 | 0 | 100 | 0 | 1 | 249 | 1456 | 1208 | Waddlia chondrophila 2032/99 annotated genome fragment, clone 1103163150273 | blastn | 15182 | 460 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 4149925 | 4149925 | PRJNA1196438_P_NODE_35044_length_297_cov_2.558036_g34618_i0 | PRJNA1196438 | 35044 | 297 | 2.558036 | 7.59736692 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 62.4 | 4.09e-9 | NR | MCH9614076.1 | 2052156 | g34618 | i0 | 46.9 | 1.29292929292929 | 64 | 32 | 62.6 | 1 | 1 | 186 | 149 | 212 | MCH9614076.1 Ribonuclease BN [Chlamydiia bacterium] | diamond | 384 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 7976334 | 7976334 | PRJNA1196438_P_NODE_27607_length_301_cov_4.179825_g27181_i0 | PRJNA1196438 | 27607 | 301 | 4.179825 | 12.58127325 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 95.5 | 2.07e-20 | NR | MBN9378883.1 | 2047757 | g27181 | i0 | 73.5 | 1.87375415282392 | 68 | 17 | 67.8 | 1 | 299 | 96 | 107 | 173 | MBN9378883.1 NADH-quinone oxidoreductase subunit L [Chlamydiales bacterium] | diamond | 564 | 95.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 12522067 | 12522067 | PRJNA1196438_P_NODE_59490_length_259_cov_1.672043_g59063_i0 | PRJNA1196438 | 59490 | 259 | 1.672043 | 4.33059137 | Neochlamydia | 112987 | Bacteria | Bacteria | 289 | 1.65e-73 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g59063 | i0 | 86.923 | 186.393822393822 | 260 | 30 | 99 | 4 | 2 | 259 | 1439 | 1182 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 48276 | 291 | 0.993127147766323 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 18174472 | 18174472 | PRJNA1196438_P_NODE_10635_length_326_cov_2.339921_g10209_i0 | PRJNA1196438 | 10635 | 326 | 2.339921 | 7.62814246 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 318 | 2.74e-82 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g10209 | i0 | 84.848 | 119.546012269939 | 330 | 34 | 99 | 14 | 1 | 325 | 653427 | 653745 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 38972 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 27293750 | 27293750 | PRJNA1196438_P_NODE_9303_length_345_cov_1.716912_g8879_i0 | PRJNA1196438 | 9303 | 345 | 1.716912 | 5.9233464 | Waddlia chondrophila | 71667 | Bacteria | Bacteria | 43.9 | 0.0425 | NR | WP_013182342.1 | 71667 | g8879 | i0 | 66.7 | 0.234782608695652 | 27 | 5 | 20 | 1 | 313 | 245 | 131 | 157 | WP_013182342.1 MFS transporter [Waddlia chondrophila] | diamond | 81 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 27628736 | 27628736 | PRJNA1196438_P_NODE_70404_length_247_cov_0.896552_g69977_i0 | PRJNA1196438 | 70404 | 247 | 0.896552 | 2.21448344 | Simkania | 34093 | Bacteria | Bacteria | 111 | 3.28e-29 | NR | MBS3903901.1 | 34094 | g69977 | i0 | 65.9 | 4.96761133603239 | 82 | 28 | 99.6 | 0 | 246 | 1 | 22 | 103 | MBS3903901.1 YjdF family protein [Simkania sp.] | diamond | 1227 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 28114611 | 28114611 | PRJNA1196438_P_NODE_4765_length_453_cov_2.731579_g4347_i0 | PRJNA1196438 | 4765 | 453 | 2.731579 | 12.37405287 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 46.6 | 0.0128 | NR | MCH9632675.1 | 2081524 | g4347 | i0 | 54.5 | 0.417218543046358 | 33 | 15 | 21.9 | 0 | 101 | 3 | 8 | 40 | MCH9632675.1 hypothetical protein [Chlamydiota bacterium] | diamond | 189 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 32538821 | 32538821 | PRJNA1196438_P_NODE_39039_length_290_cov_2.594470_g38612_i0 | PRJNA1196438 | 39039 | 290 | 2.59447 | 7.523963 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 138 | 3.94e-37 | NR | MCH9632073.1 | 2081524 | g38612 | i0 | 72.9 | 0.993103448275862 | 96 | 26 | 99.3 | 0 | 1 | 288 | 1 | 96 | MCH9632073.1 Peptidoglycan glycosyltransferase MrdB [Chlamydiota bacterium] | diamond | 288 | 138 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;