RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196438" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196438 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26755783 26755783 PRJNA1196438_P_NODE_69021_length_248_cov_1.782857_g68594_i0 PRJNA1196438 69021 248 1.782857 4.42148536 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 41.6 0.0278   NR MCK5015270.1 2035772 g68594 i0 59.3 0.326612903225806 27 11 32.7 0 245 165 77 103 MCK5015270.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 81 41.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30799066 30799066 PRJNA1196438_P_NODE_72654_length_245_cov_0.906977_g72227_i0 PRJNA1196438 72654 245 0.906977 2.22209365 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 163 3.09e-50   NR MFH1338659.1 2035772 g72227 i0 100 0.979591836734694 80 0 98 0 5 244 38 117 MFH1338659.1 PilZ domain-containing protein [Candidatus Omnitrophota bacterium] diamond 240 163 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;