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contig_metadata

4 rows where bioproject = "PRJNA1196438" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1196438 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1597841 1597841 PRJNA1196438_P_NODE_50222_length_273_cov_1.180000_g49795_i0 PRJNA1196438 50222 273 1.18 3.2214 Skokie tombus-like virus 2789423 Viruses Viruses 460 3.5099999999999996e-125   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g49795 i0 97.07 1 273 8 100 0 1 273 1133 861 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 273 460 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
4150203 4150203 PRJNA1196438_P_NODE_55744_length_264_cov_3.078534_g55317_i0 PRJNA1196438 55744 264 3.078534 8.12732976 Skokie tombus-like virus 2789423 Viruses Viruses 486 5.579999999999999e-133   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g55317 i0 100 0.996212121212121 263 0 99 0 1 263 111 373 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 263 486 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
27736220 27736220 PRJNA1196438_P_NODE_66184_length_251_cov_0.876404_g65757_i0 PRJNA1196438 66184 251 0.876404 2.19977404 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 168 7.449999999999998e-47   NR CAI9858974.1 3048756 g65757 i0 97.5 0.944223107569721 79 2 94.4 0 238 2 1 79 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 237 168 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
32715033 32715033 PRJNA1196438_P_NODE_51260_length_271_cov_2.121212_g50833_i0 PRJNA1196438 51260 271 2.121212 5.74848452 Chuvivirus 2842604 Viruses Viruses 130 2.31e-33   NR WET19887.1 2842604 g50833 i0 68.2 1.94833948339483 88 28 97.4 0 5 268 301 388 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 528 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;