RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA1196438" and tax_kingdom = "Loebvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 8 ✖

bioproject 1

  • PRJNA1196438 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1598056 1598056 PRJNA1196438_P_NODE_65122_length_252_cov_0.871508_g64695_i0 PRJNA1196438 65122 252 0.871508 2.19620016 Inoviridae sp. 2219103 Viruses Viruses 466 6.89e-127   NTclustered gi|2056968978|tpg|BK023083.1| 2219103 g64695 i0 100 8.37698412698413 252 0 100 0 1 252 2590 2841 MAG TPA_asm: Inoviridae sp. isolate ctgha17, partial genome blastn 2111 466 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14352113 14352113 PRJNA1196438_P_NODE_41172_length_287_cov_1.836449_g40745_i0 PRJNA1196438 41172 287 1.836449 5.27060863 Inoviridae sp. 2219103 Viruses Viruses 499 7.88e-137   NTclustered gi|2056883065|tpg|BK053528.1| 2219103 g40745 i0 98.582 5.93379790940767 282 4 98 0 1 282 10245 10526 MAG TPA_asm: Inoviridae sp. isolate ctWfi4, partial genome blastn 1703 499 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
16900157 16900157 PRJNA1196438_P_NODE_36594_length_294_cov_2.438914_g36168_i0 PRJNA1196438 36594 294 2.438914 7.17040716 Inoviridae sp. 2219103 Viruses Viruses 141 5.66e-29   NTclustered gi|2059758042|tpg|BK028106.1| 2219103 g36168 i0 88.696 0.391156462585034 115 13 39 0 174 288 720 606 MAG TPA_asm: Inoviridae sp. isolate ctbXF9, partial genome blastn 115 141 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
26723837 26723837 PRJNA1196438_P_NODE_5041_length_442_cov_2.720867_g4622_i0 PRJNA1196438 5041 442 2.720867 12.02623214 Escherichia phage Copypasta 3096133 Viruses Viruses 60.1 4.2e-9   NR WPH57058.1 3096133 g4622 i0 64 0.644796380090498 50 18 33.9 0 326 177 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 285 60.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
27230497 27230497 PRJNA1196438_P_NODE_62083_length_255_cov_1.802198_g61656_i0 PRJNA1196438 62083 255 1.802198 4.5956049 Escherichia phage Copypasta 3096133 Viruses Viruses 48.1 3.07e-5   NR WPH57058.1 3096133 g61656 i0 64.1 0.458823529411765 39 14 45.9 0 250 134 18 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 117 48.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
28620120 28620120 PRJNA1196438_P_NODE_46007_length_279_cov_2.616505_g45580_i0 PRJNA1196438 46007 279 2.616505 7.30004895 Escherichia phage Copypasta 3096133 Viruses Viruses 70.9 4.5e-14   NR WPH57058.1 3096133 g45580 i0 62.5 0.602150537634409 56 21 60.2 0 8 175 1 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 168 70.9 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
28999198 28999198 PRJNA1196438_P_NODE_55688_length_264_cov_3.680628_g55261_i0 PRJNA1196438 55688 264 3.680628 9.71685792 Escherichia phage Copypasta 3096133 Viruses Viruses 56.6 1.63e-8   NR WPH57058.1 3096133 g55261 i0 66 0.568181818181818 50 17 56.8 0 237 88 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 56.6 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29093739 29093739 PRJNA1196438_P_NODE_78708_length_236_cov_4.736196_g78281_i0 PRJNA1196438 78708 236 4.736196 11.17742256 Escherichia phage Copypasta 3096133 Viruses Viruses 49.7 6.17e-6   NR WPH57058.1 3096133 g78281 i0 74.3 0.444915254237288 35 9 44.5 0 85 189 1 35 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 105 49.7 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;