contig_metadata
5 rows where bioproject = "PRJNA1196438" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5426029 | 5426029 | PRJNA1196438_P_NODE_10725_length_325_cov_2.400794_g10299_i0 | PRJNA1196438 | 10725 | 325 | 2.400794 | 7.8025805 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 206 | 2.2199999999999994e-48 | NTclustered | gi|1360638125|gb|AC277041.1| | 574566 | g10299 | i0 | 87.64 | 1.06769230769231 | 178 | 21 | 54 | 1 | 1 | 177 | 39530 | 39707 | Coccomyxa subellipsoidea C-169 clone FAHX05-A01, complete sequence | blastn | 347 | 206 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 16345812 | 16345812 | PRJNA1196438_P_NODE_35733_length_295_cov_4.247748_g35307_i0 | PRJNA1196438 | 35733 | 295 | 4.247748 | 12.5308566 | Chlamydomonas | 3052 | Plants | Plants | 89.8 | 2.09e-13 | NTclustered | gi|953272927|gb|KT625417.1| | 35704 | g35307 | i0 | 96.296 | 2.08135593220339 | 54 | 2 | 18 | 0 | 37 | 90 | 10217 | 10164 | Chlamydomonas applanata culture-collection SAG:11-9 chloroplast, partial genome | blastn | 614 | 89.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas applanata | |
| 27723640 | 27723640 | PRJNA1196438_P_NODE_82584_length_228_cov_3.290323_g82157_i0 | PRJNA1196438 | 82584 | 228 | 3.290323 | 7.50193644 | root | 1 | Root_unresolved | Root_unresolved | 65.9 | 2.12e-10 | NR | 7VCF_W | 3055 | g82157 | i0 | 50 | 408.210526315789 | 68 | 34 | 89.5 | 0 | 3 | 206 | 382 | 449 | 7VCF_W Chain W, Tic20-Venus-Flag [Chlamydomonas reinhardtii] | diamond | 93072 | 66.2 | 0.995468277945619 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 30641040 | 30641040 | PRJNA1196438_P_NODE_50193_length_273_cov_1.310000_g49766_i0 | PRJNA1196438 | 50193 | 273 | 1.31 | 3.5763 | Coccomyxa elongata | 1965095 | Plants | Plants | 80.1 | 3.86e-15 | NR | CAL8469604.1 | 1965095 | g49766 | i0 | 44.2 | 1.89010989010989 | 86 | 43 | 94.5 | 1 | 265 | 8 | 616 | 696 | CAL8469604.1 g9145 [Coccomyxa elongata] | diamond | 516 | 80.1 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa elongata | ||
| 31336320 | 31336320 | PRJNA1196438_P_NODE_74856_length_243_cov_1.400000_g74429_i0 | PRJNA1196438 | 74856 | 243 | 1.4 | 3.402 | Scenedesmus sp. NREL 46B-D3 | 2650976 | Plants | Plants | 41.2 | 0.0366 | NR | KAF6259096.1 | 2650976 | g74429 | i0 | 55.8 | 0.530864197530864 | 43 | 17 | 50.6 | 1 | 64 | 186 | 15 | 57 | KAF6259096.1 hypothetical protein COO60DRAFT_1515373 [Scenedesmus sp. NREL 46B-D3] | diamond | 129 | 41.2 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Scenedesmus | Scenedesmus sp. NREL 46B-D3 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;