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contig_metadata

8 rows where bioproject = "PRJNA1196438", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA1196438 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4149771 4149771 PRJNA1196438_P_NODE_10484_length_328_cov_1.713725_g10058_i0 PRJNA1196438 10484 328 1.713725 5.621018 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 595 1.1399999999999998e-165   NTclustered gi|586566212|gb|KF990477.1| 79327 g10058 i0 99.39 1 328 2 100 0 1 328 138 465 Schmidtea mediterranea strain CIW4 YKI (yki) mRNA, complete cds blastn 328 595 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
11802085 11802085 PRJNA1196438_P_NODE_730_length_1195_cov_8.914439_g504_i0 PRJNA1196438 730 1195 8.914439 106.52754605 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 1711 0   NTclustered gi|586566212|gb|KF990477.1| 79327 g504 i0 98.561 8.41338912133891 973 4 81 6 1 964 1223 2194 Schmidtea mediterranea strain CIW4 YKI (yki) mRNA, complete cds blastn 10054 1711 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
16900159 16900159 PRJNA1196438_P_NODE_36694_length_294_cov_2.099548_g36268_i0 PRJNA1196438 36694 294 2.099548 6.17267112 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 73.1 2.09e-8   NTclustered gi|690548740|emb|LN102255.1| 99802 g36268 i0 72.556 1.32312925170068 266 57 88 16 3 261 1232 976 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0096713 blastn 389 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
16900358 16900358 PRJNA1196438_P_NODE_51594_length_271_cov_0.954545_g51167_i0 PRJNA1196438 51594 271 0.954545 2.58681695 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 490 4.44e-134   NTclustered gi|586566212|gb|KF990477.1| 79327 g51167 i0 99.262 1 271 2 100 0 1 271 734 464 Schmidtea mediterranea strain CIW4 YKI (yki) mRNA, complete cds blastn 271 490 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
21999614 21999614 PRJNA1196438_P_NODE_10538_length_327_cov_2.602362_g10112_i0 PRJNA1196438 10538 327 2.602362 8.50972374 Dibothriocephalus latus 60516 Platyhelminthes Platyhelminthes 131 3.45e-36   NR VDN22910.1 60516 g10112 i0 57.4 2.93577981651376 108 45 98.2 1 323 3 27 134 VDN22910.1 unnamed protein product, partial [Dibothriocephalus latus] diamond 960 131 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus
27028195 27028195 PRJNA1196438_P_NODE_46602_length_278_cov_2.853659_g46175_i0 PRJNA1196438 46602 278 2.853659 7.93317202 Metazoa 33208 Platyhelminthes Platyhelminthes 59.7 3.36e-8   NR PAA58506.1 282301 g46175 i0 36.1 1.73741007194245 83 39 77.7 3 34 249 134 213 PAA58506.1 hypothetical protein BOX15_Mlig007719g1 [Macrostomum lignano] diamond 483 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27975799 27975799 PRJNA1196438_P_NODE_7665_length_373_cov_1.816667_g7243_i0 PRJNA1196438 7665 373 1.816667 6.77616791 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 114 1.78e-29   NR CDS26983.2 85433 g7243 i0 50.4 1.89812332439678 117 55 94.1 1 360 10 35 148 CDS26983.2 RNA and export factor binding protein 2 [Hymenolepis microstoma] diamond 708 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
28922894 28922894 PRJNA1196438_P_NODE_4848_length_450_cov_2.785146_g4430_i0 PRJNA1196438 4848 450 2.785146 12.533157 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 247 1.04e-77   NR CAE55205.1 37629 g4430 i0 72 256.453333333333 150 42 100 0 450 1 16 165 CAE55205.1 beta-tubulin [Gyrodactylus salaris] diamond 115404 247 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;