RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196438", tax_clade = "Discoba" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1196438 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29030650 29030650 PRJNA1196438_P_NODE_71288_length_246_cov_1.797688_g70861_i0 PRJNA1196438 71288 246 1.797688 4.42231248 Acrasis kona 1008807 Heterolobosea other_Eukaryota 67.8 5.92e-11   NR KAL0481111.1 1008807 g70861 i0 35.8 0.98780487804878 81 41 98.8 1 3 245 282 351 KAL0481111.1 VPS13 [Acrasis kona] diamond 243 67.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30577756 30577756 PRJNA1196438_P_NODE_40533_length_288_cov_1.697674_g40106_i0 PRJNA1196438 40533 288 1.697674 4.88930112 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 44.3 0.0167   NR KAJ9440407.1 91374 g40106 i0 48.9 0.489583333333333 47 24 49 0 72 212 113 159 KAJ9440407.1 Glyoxylate/hydroxypyruvate reductase A [Diplonema papillatum] diamond 141 44.3 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;