RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA1196438", tax_clade = "DNA satellites" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 1 ✖

tax_clade 1

  • DNA satellites · 1 ✖

bioproject 1

  • PRJNA1196438 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18174843 18174843 PRJNA1196438_P_NODE_50915_length_271_cov_16.580808_g50488_i0 PRJNA1196438 50915 271 16.580808 44.93398968 Tick-associated circular DNA satellite 2963853 Viruses Viruses 496 9.55e-136   NTclustered gi|2271980613|gb|ON668992.1| 2963853 g50488 i0 99.631 1.98892988929889 271 1 100 0 1 271 308 578 Tick-associated circular DNA satellite isolate LAHC01-1sat, complete sequence blastn 539 496 1 Viruses DNA satellites             Tick-associated circular DNA satellite

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;