RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196438", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1196438 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28967409 28967409 PRJNA1196438_P_NODE_5648_length_419_cov_3.754335_g5229_i0 PRJNA1196438 5648 419 3.754335 15.73066365 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 76.3 4.07e-13   NR MCK4553875.1 2762014 g5229 i0 44.9 0.558472553699284 78 34 55.8 2 46 279 341 409 MCK4553875.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 234 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29567056 29567056 PRJNA1196438_P_NODE_59350_length_259_cov_2.010753_g58923_i0 PRJNA1196438 59350 259 2.010753 5.20785027 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 97.1 9.099999999999997e-24   NR MFM2383622.1 2762014 g58923 i0 78.2 0.637065637065637 55 12 63.7 0 7 171 66 120 MFM2383622.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 165 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;