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contig_metadata

17 rows where bioproject = "PRJNA1196384" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1196384 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
322711 322711 PRJNA1196384_S_NODE_4921_length_183_cov_1.239726_g4857_i0 PRJNA1196384 4921 183 1.239726 2.26869858 Haloferax volcanii 2246 Archaea Archaea 289 1.0899999999999998e-73   NTclustered gi|291372972|gb|CP001957.1| 309800 g4857 i0 95.082 55.120218579235 183 9 100 0 1 183 51948 52130 Haloferax volcanii DS2 plasmid pHV1, complete sequence blastn 10087 289 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
2318545 2318545 PRJNA1196384_S_NODE_8542_length_150_cov_0.964602_g8478_i0 PRJNA1196384 8542 150 0.964602 1.446903 archaeon 1906665 Archaea Archaea 88.2 3.42e-20   NR RYG65321.1 1906665 g8478 i0 87.8 0.98 49 6 98 0 3 149 100 148 RYG65321.1 MAG: hypothetical protein EON64_12195 [archaeon] diamond 147 88.2 1 Archaea               archaeon
10526508 10526508 PRJNA1196384_S_NODE_8029_length_153_cov_1.008621_g7965_i0 PRJNA1196384 8029 153 1.008621 1.54319013 Natrinema longum 370324 Archaea Archaea 217 4.2e-52   NTclustered gi|2006040148|gb|CP071463.1| 370324 g7965 i0 92.157 7.95424836601307 153 12 100 0 1 153 1074094 1074246 Natrinema longum strain ABH32 chromosome, complete genome blastn 1217 217 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema longum
13076373 13076373 PRJNA1196384_S_NODE_8491_length_150_cov_1.353982_g8427_i0 PRJNA1196384 8491 150 1.353982 2.030973 archaeon 1906665 Archaea Archaea 100 4.63e-23   NR RYG69930.1 1906665 g8427 i0 95.8 0.96 48 2 96 0 2 145 390 437 RYG69930.1 MAG: hypothetical protein EON64_01505 [archaeon] diamond 144 100 1 Archaea               archaeon
21999430 21999430 PRJNA1196384_S_NODE_2638_length_239_cov_1.148515_g2574_i0 PRJNA1196384 2638 239 1.148515 2.74495085 archaeon 1906665 Archaea Archaea 121 2.0899999999999996e-31   NR RYH05201.1 1906665 g2574 i0 72.5 1.00418410041841 80 21 99.2 1 237 1 62 141 RYH05201.1 MAG: hypothetical protein EON65_45370 [archaeon] diamond 240 121 1 Archaea               archaeon
24548851 24548851 PRJNA1196384_S_NODE_7460_length_157_cov_0.975000_g7396_i0 PRJNA1196384 7460 157 0.975 1.53075 archaeon 1906665 Archaea Archaea 101 3.27e-24   NR RYH05201.1 1906665 g7396 i0 88.2 0.974522292993631 51 6 97.5 0 1 153 230 280 RYH05201.1 MAG: hypothetical protein EON65_45370 [archaeon] diamond 153 101 1 Archaea               archaeon
27167104 27167104 PRJNA1196384_S_NODE_6582_length_164_cov_0.921260_g6518_i0 PRJNA1196384 6582 164 0.92126 1.5108664 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 95.9 1.53e-22   NR NYT12920.1 2099674 g6518 i0 88.2 5.61585365853659 51 6 93.3 0 162 10 169 219 NYT12920.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Candidatus Methanofastidiosia archaeon] diamond 921 95.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
27988479 27988479 PRJNA1196384_S_NODE_5085_length_181_cov_1.076389_g5021_i0 PRJNA1196384 5085 181 1.076389 1.94826409 archaeon 1906665 Archaea Archaea 79 3.16e-17   NR RYH18874.1 1906665 g5021 i0 63.3 0.994475138121547 60 20 99.4 1 180 1 43 100 RYH18874.1 MAG: hypothetical protein EON65_26765 [archaeon] diamond 180 79 1 Archaea               archaeon
28967376 28967376 PRJNA1196384_S_NODE_5008_length_182_cov_1.068966_g4944_i0 PRJNA1196384 5008 182 1.068966 1.94551812 archaeon 1906665 Archaea Archaea 53.9 1.83e-6   NR RYG63737.1 1906665 g4944 i0 56.9 0.840659340659341 51 21 84.1 1 182 30 267 316 RYG63737.1 MAG: hypothetical protein EON64_15325, partial [archaeon] diamond 153 53.9 1 Archaea               archaeon
29188457 29188457 PRJNA1196384_S_NODE_4449_length_190_cov_1.274510_g4385_i0 PRJNA1196384 4449 190 1.27451 2.421569 Natronomonas sp. 2184060 Archaea Archaea 50.1 4.66e-5   NR WP_310677108.1 2184060 g4385 i0 48 0.789473684210526 50 26 78.9 0 170 21 240 289 WP_310677108.1 hypothetical protein [Natronomonas sp.] diamond 150 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp.
29472124 29472124 PRJNA1196384_S_NODE_4210_length_194_cov_1.713376_g4146_i0 PRJNA1196384 4210 194 1.713376 3.32394944 archaeon 1906665 Archaea Archaea 103 7.6e-25   NR RYG65161.1 1906665 g4146 i0 71.9 1.97938144329897 64 18 99 0 194 3 219 282 RYG65161.1 MAG: hypothetical protein EON64_12505 [archaeon] diamond 384 103 1 Archaea               archaeon
30072376 30072376 PRJNA1196384_S_NODE_8532_length_150_cov_1.008850_g8468_i0 PRJNA1196384 8532 150 1.00885 1.513275 archaeon 1906665 Archaea Archaea 76.6 4.89e-16   NR RYG68310.1 1906665 g8468 i0 80.9 0.94 47 9 94 0 146 6 32 78 RYG68310.1 MAG: hypothetical protein EON64_05455 [archaeon] diamond 141 76.6 1 Archaea               archaeon
30735879 30735879 PRJNA1196384_S_NODE_2114_length_268_cov_1.865801_g2050_i0 PRJNA1196384 2114 268 1.865801 5.00034668 archaeon 1906665 Archaea Archaea 138 4.68e-40   NR RYG63904.1 1906665 g2050 i0 85.7 0.940298507462687 84 12 94 0 266 15 43 126 RYG63904.1 MAG: hypothetical protein EON64_15030 [archaeon] diamond 252 138 1 Archaea               archaeon
30735882 30735882 PRJNA1196384_S_NODE_6254_length_167_cov_0.900000_g6190_i0 PRJNA1196384 6254 167 0.9 1.503 Promethearchaeia archaeon 3067280 Archaea Archaea 52.4 2.86e-6   NR MFB0561400.1 3067280 g6190 i0 41.8 0.988023952095808 55 31 98.8 1 2 166 46 99 MFB0561400.1 class I SAM-dependent methyltransferase [Promethearchaeia archaeon] diamond 165 52.4 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32399485 32399485 PRJNA1196384_S_NODE_8439_length_150_cov_2.000000_g8375_i0 PRJNA1196384 8439 150 2 3 Nitrosopumilus 338191 Archaea Archaea 80.5 4.37e-16   NR WP_218843338.1 1470067 g8375 i0 73.5 7.84 49 13 98 0 3 149 235 283 WP_218843338.1 multicopper oxidase domain-containing protein [Nitrosopumilus ureiphilus] diamond 1176 80.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus ureiphilus
32412123 32412123 PRJNA1196384_S_NODE_6939_length_161_cov_1.016129_g6875_i0 PRJNA1196384 6939 161 1.016129 1.63596769 archaeon 1906665 Archaea Archaea 44.7 0.00256   NR RYG67429.1 1906665 g6875 i0 51.2 0.801242236024845 43 21 80.1 0 129 1 1 43 RYG67429.1 MAG: hypothetical protein EON64_07455 [archaeon] diamond 129 44.7 1 Archaea               archaeon
32443952 32443952 PRJNA1196384_S_NODE_8499_length_150_cov_1.212389_g8435_i0 PRJNA1196384 8499 150 1.212389 1.8185835 archaeon 1906665 Archaea Archaea 70.9 4.33e-13   NR RYH18875.1 1906665 g8435 i0 77.1 0.96 48 11 96 0 145 2 131 178 RYH18875.1 MAG: hypothetical protein EON65_26770 [archaeon] diamond 144 70.9 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;