contig_metadata
12 rows where bioproject = "PRJNA1196384" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1597280 | 1597280 | PRJNA1196384_S_NODE_3222_length_217_cov_1.344444_g3158_i0 | PRJNA1196384 | 3222 | 217 | 1.344444 | 2.91744348 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 342 | 1.02e-89 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g3158 | i0 | 94.977 | 115.345622119816 | 219 | 9 | 100 | 2 | 1 | 217 | 15907 | 16125 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 25030 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 2873448 | 2873448 | PRJNA1196384_S_NODE_2763_length_233_cov_4.571429_g2699_i0 | PRJNA1196384 | 2763 | 233 | 4.571429 | 10.65142957 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 300 | 6.74e-77 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g2699 | i0 | 91.071 | 285.995708154506 | 224 | 16 | 95 | 4 | 12 | 233 | 16295 | 16074 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 66637 | 300 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 2873541 | 2873541 | PRJNA1196384_S_NODE_843_length_418_cov_21.188976_g779_i0 | PRJNA1196384 | 843 | 418 | 21.188976 | 88.56991968 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 492 | 1.9999999999999996e-134 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g779 | i0 | 91.808 | 235 | 354 | 27 | 84 | 2 | 67 | 418 | 1320589 | 1320236 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 98230 | 492 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 4149623 | 4149623 | PRJNA1196384_S_NODE_4144_length_195_cov_2.537975_g4080_i0 | PRJNA1196384 | 4144 | 195 | 2.537975 | 4.94905125 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 305 | 1.17e-78 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g4080 | i0 | 94.872 | 95.2615384615385 | 195 | 10 | 100 | 0 | 1 | 195 | 955 | 1149 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 18576 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 10526391 | 10526391 | PRJNA1196384_S_NODE_1209_length_352_cov_2.622222_g1145_i0 | PRJNA1196384 | 1209 | 352 | 2.622222 | 9.23022144 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 455 | 2.17e-123 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g1145 | i0 | 92.744 | 246.039772727273 | 317 | 20 | 90 | 3 | 1 | 316 | 2748639 | 2748325 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 86606 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11801179 | 11801179 | PRJNA1196384_S_NODE_1190_length_355_cov_2.773585_g1126_i0 | PRJNA1196384 | 1190 | 355 | 2.773585 | 9.84622675 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 621 | 2.04e-173 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g1126 | i0 | 98.305 | 271.684507042254 | 354 | 6 | 99 | 0 | 1 | 354 | 17809 | 18162 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 96448 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 11801180 | 11801180 | PRJNA1196384_S_NODE_1250_length_345_cov_5.259740_g1186_i0 | PRJNA1196384 | 1250 | 345 | 5.25974 | 18.146103 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 322 | 2.25e-83 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g1186 | i0 | 87.912 | 179.098550724638 | 273 | 33 | 79 | 0 | 1 | 273 | 631813 | 631541 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 61789 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 11801215 | 11801215 | PRJNA1196384_S_NODE_3790_length_203_cov_2.915663_g3726_i0 | PRJNA1196384 | 3790 | 203 | 2.915663 | 5.91879589 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 196 | 7.72e-46 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g3726 | i0 | 85.204 | 122.674876847291 | 196 | 23 | 96 | 5 | 1 | 195 | 3803530 | 3803720 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 24903 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 21999448 | 21999448 | PRJNA1196384_S_NODE_358_length_609_cov_4.921329_g301_i0 | PRJNA1196384 | 358 | 609 | 4.921329 | 29.97089361 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 497 | 6.45e-136 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g301 | i0 | 83.835 | 240.896551724138 | 532 | 77 | 87 | 7 | 1 | 529 | 924 | 1449 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 146706 | 497 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 25269345 | 25269345 | PRJNA1196384_S_NODE_1940_length_281_cov_4.381148_g1876_i0 | PRJNA1196384 | 1940 | 281 | 4.381148 | 12.31102588 | Akkermansia | 239934 | Bacteria | Bacteria | 326 | 1.38e-84 | NTclustered | gi|183579827|emb|AM905424.1| | 239935 | g1876 | i0 | 87.676 | 299.163701067616 | 284 | 30 | 100 | 4 | 1 | 281 | 923 | 1204 | Akkermansia muciniphila 23S rRNA gene, strain CIP107961 | blastn | 84065 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 29535553 | 29535553 | PRJNA1196384_S_NODE_6170_length_168_cov_0.885496_g6106_i0 | PRJNA1196384 | 6170 | 168 | 0.885496 | 1.48763328 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 106 | 3.95e-28 | NR | MEI6568784.1 | 2026799 | g6106 | i0 | 89.3 | 1 | 56 | 6 | 100 | 0 | 168 | 1 | 60 | 115 | MEI6568784.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 168 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31431249 | 31431249 | PRJNA1196384_S_NODE_1016_length_380_cov_1.314869_g952_i0 | PRJNA1196384 | 1016 | 380 | 1.314869 | 4.9965022 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 104 | 1.5199999999999995e-23 | NR | HLH54161.1 | 2499141 | g952 | i0 | 47.2 | 1.70526315789474 | 106 | 53 | 81.3 | 1 | 5 | 313 | 318 | 423 | HLH54161.1 CRTAC1 family protein [Verrucomicrobiia bacterium] | diamond | 648 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;