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contig_metadata

11 rows where bioproject = "PRJNA1196384" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196384 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
322661 322661 PRJNA1196384_S_NODE_1641_length_306_cov_2.918216_g1577_i0 PRJNA1196384 1641 306 2.918216 8.92974096 Metazoa 33208 Nematoda Nematoda 93.2 3.25e-22   NR VDO16994.1 42155 g1577 i0 65.6 9.53921568627451 64 22 62.7 0 305 114 33 96 VDO16994.1 unnamed protein product [Brugia timori] diamond 2919 94 0.991489361702128 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia timori
5425828 5425828 PRJNA1196384_S_NODE_1645_length_306_cov_1.702602_g1581_i0 PRJNA1196384 1645 306 1.702602 5.20996212 Nematoda 6231 Nematoda Nematoda 135 1.14e-35   NR KAF8355513.1 54126 g1581 i0 55 2.96078431372549 100 45 98 0 1 300 301 400 KAF8355513.1 asp-3, partial [Pristionchus pacificus] diamond 906 136 0.992647058823529 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
13076312 13076312 PRJNA1196384_S_NODE_4971_length_182_cov_1.806897_g4907_i0 PRJNA1196384 4971 182 1.806897 3.28855254 Bursaphelenchus 6324 Nematoda Nematoda 94 5.6100000000000005e-22   NR CAD5212188.1 6326 g4907 i0 68.3 2.96703296703297 60 19 98.9 0 181 2 34 93 CAD5212188.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 540 94 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
18174361 18174361 PRJNA1196384_S_NODE_7195_length_159_cov_0.950820_g7131_i0 PRJNA1196384 7195 159 0.95082 1.5118038 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 95.5 2.9700000000000003e-21   NR CAD5214912.1 465554 g7131 i0 80.8 2.94339622641509 52 10 98.1 0 3 158 157 208 CAD5214912.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 468 95.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
19448710 19448710 PRJNA1196384_S_NODE_2736_length_234_cov_6.340102_g2672_i0 PRJNA1196384 2736 234 6.340102 14.83583868 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.3 3.04e-20   NR KAK6031511.1 6317 g2672 i0 80.9 12.0512820512821 47 9 60.3 0 231 91 23 69 KAK6031511.1 ribosomal protein S14p/S29e [Ostertagia ostertagi] diamond 2820 86.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
23274922 23274922 PRJNA1196384_S_NODE_3419_length_212_cov_2.051429_g3355_i0 PRJNA1196384 3419 212 2.051429 4.34902948 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 101 6.149999999999999e-23   NR KAF7639314.1 189291 g3355 i0 69.6 4.91037735849057 69 21 97.6 0 1 207 565 633 KAF7639314.1 Tr-type G domain-containing protein [Meloidogyne graminicola] diamond 1041 102 0.990196078431373 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
26692555 26692555 PRJNA1196384_S_NODE_1221_length_349_cov_4.516026_g1157_i0 PRJNA1196384 1221 349 4.516026 15.76093074 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 52.4 5.29e-5   NR KAE9547610.1 2598192 g1157 i0 42 1.16905444126075 50 29 43 0 4 153 444 493 KAE9547610.1 hypothetical protein FO519_009180 [Halicephalobus sp. NKZ332] diamond 408 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
29365166 29365166 PRJNA1196384_S_NODE_7709_length_155_cov_1.322034_g7645_i0 PRJNA1196384 7709 155 1.322034 2.0491527 Metazoa 33208 Nematoda Nematoda 72.4 3.82e-13   NR CAK18211.1 6253 g7645 i0 67.9 14.2064516129032 53 15 98.7 1 154 2 57 109 CAK18211.1 putative disulphide isomerase [Ascaris suum] diamond 2202 72.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ascarididae Ascaris Ascaris suum
31810887 31810887 PRJNA1196384_S_NODE_7117_length_159_cov_2.204918_g7053_i0 PRJNA1196384 7117 159 2.204918 3.50581962 Prionchulus punctatus 293874 Nematoda Nematoda 65.5 2.13e-11   NR ADK34019.1 293874 g7053 i0 59.6 9.52830188679245 47 19 88.7 0 157 17 114 160 ADK34019.1 ubiquitin-Like family 1 [Prionchulus punctatus] diamond 1515 65.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Mononchida Mononchidae Prionchulus Prionchulus punctatus
32209575 32209575 PRJNA1196384_S_NODE_2418_length_249_cov_4.089623_g2354_i0 PRJNA1196384 2418 249 4.089623 10.18316127 Rhabditida 6236 Nematoda Nematoda 124 7.55e-33   NR KAF8357535.1 54126 g2354 i0 68.3 15.8192771084337 82 26 98.8 0 3 248 17 98 KAF8357535.1 rps-1 [Pristionchus pacificus] diamond 3939 124 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
32273009 32273009 PRJNA1196384_S_NODE_6558_length_164_cov_1.220472_g6494_i0 PRJNA1196384 6558 164 1.220472 2.00157408 Trichuris 36086 Nematoda Nematoda 82 1.68e-16   NR CDW58081.1 36087 g6494 i0 72.2 6.8780487804878 54 15 98.8 0 164 3 344 397 CDW58081.1 vacuolar protein sorting associated protein 4A [Trichuris trichiura] diamond 1128 82.8 0.990338164251208 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;