RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA1196384" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196384 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2873458 2873458 PRJNA1196384_S_NODE_3663_length_206_cov_2.065089_g3599_i0 PRJNA1196384 3663 206 2.065089 4.25408334 Mercenaria mercenaria 6596 Mollusca Mollusca 111 2.93e-20   NTclustered gi|2160869370|ref|XM_045311120.1| 6596 g3599 i0 91.358 3.98058252427184 81 7 39 0 7 87 291 371 PREDICTED: Mercenaria mercenaria FAU ubiquitin-like and ribosomal protein S30 (LOC123530348), transcript variant X1, mRNA blastn 820 111 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
2873533 2873533 PRJNA1196384_S_NODE_8083_length_152_cov_3.608696_g8019_i0 PRJNA1196384 8083 152 3.608696 5.48521792 Littorina saxatilis 31220 Mollusca Mollusca 158 2.56e-34   NTclustered gi|2868618654|ref|XM_070344692.1| 31220 g8019 i0 85.526 9.78947368421053 152 20 99 2 1 151 188 338 PREDICTED: Littorina saxatilis small ribosomal subunit protein uS15 (LOC138971860), mRNA blastn 1488 158 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
5425813 5425813 PRJNA1196384_S_NODE_1025_length_378_cov_2.659824_g961_i0 PRJNA1196384 1025 378 2.659824 10.05413472 Bivalvia 6544 Mollusca Mollusca 201 8.93e-61   NR XP_022332497.1 6565 g961 i0 75.2 6.92857142857143 125 31 99.2 0 377 3 1 125 XP_022332497.1 60S ribosomal protein L4-like [Crassostrea virginica] diamond 2619 202 0.995049504950495 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
10526516 10526516 PRJNA1196384_S_NODE_889_length_408_cov_2.358491_g825_i0 PRJNA1196384 889 408 2.358491 9.62264328 Opisthokonta 33154 Mollusca Mollusca 130 8.37e-36   NR XP_052283933.1 45954 g825 i0 55.8 10.4411764705882 120 50 86 1 396 46 12 131 XP_052283933.1 60S ribosomal protein L22-like [Dreissena polymorpha] diamond 4260 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
11801290 11801290 PRJNA1196384_S_NODE_790_length_432_cov_4.405063_g726_i0 PRJNA1196384 790 432 4.405063 19.02987216 Biomphalaria glabrata 6526 Mollusca Mollusca 206 3.02e-48   NTclustered gi|2502173393|ref|XM_056030510.1| 6526 g726 i0 78.616 5.0787037037037 318 62 73 5 111 425 517 203 PREDICTED: Biomphalaria glabrata 40S ribosomal protein S20-like (LOC106075322), mRNA blastn 2194 206 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
13076250 13076250 PRJNA1196384_S_NODE_1171_length_357_cov_6.956250_g1107_i0 PRJNA1196384 1171 357 6.95625 24.8338125 Neomphalida 3120499 Mollusca Mollusca 207 1.42e-65   NR GFN93885.1 259542 g1107 i0 83.9 3.96638655462185 118 19 99.2 0 356 3 2 119 GFN93885.1 ribosomal protein l15 [Plakobranchus ocellatus] diamond 1416 209 0.990430622009569 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus
13796514 13796514 PRJNA1196384_S_NODE_311_length_639_cov_4.023256_g257_i0 PRJNA1196384 311 639 4.023256 25.70860584 Dreissena polymorpha 45954 Mollusca Mollusca 181 1.9299999999999994e-54   NR XP_052229778.1 45954 g257 i0 68.8 3.33333333333333 141 44 66.2 0 471 49 30 170 XP_052229778.1 60S ribosomal protein L23a-like [Dreissena polymorpha] diamond 2130 181 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
15625480 15625480 PRJNA1196384_S_NODE_473_length_540_cov_9.099404_g411_i0 PRJNA1196384 473 540 9.099404 49.1367816 Mytilus coruscus 42192 Mollusca Mollusca 83.6 4.36e-15   NR CAC5394559.1 42192 g411 i0 37.1 1.55 143 77 72.2 3 512 123 346 488 CAC5394559.1 RAB32 [Mytilus coruscus] diamond 837 83.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
16345662 16345662 PRJNA1196384_S_NODE_3073_length_222_cov_1.248649_g3009_i0 PRJNA1196384 3073 222 1.248649 2.77200078 Metazoa 33208 Mollusca Mollusca 409 1.0100000000000001e-109   NTclustered gi|1928112764|gb|MT947788.1| 6523 g3009 i0 100 99.4324324324324 221 0 99 0 2 222 457 237 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 22074 409 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
26806662 26806662 PRJNA1196384_S_NODE_841_length_419_cov_4.837696_g777_i0 PRJNA1196384 841 419 4.837696 20.26994624 Metazoa 33208 Mollusca Mollusca 165 1.35e-49   NR XP_022289768.1 6565 g777 i0 68.6 6.93078758949881 121 38 86.6 0 417 55 14 134 XP_022289768.1 60S ribosomal protein L32-like [Crassostrea virginica] diamond 2904 166 0.993975903614458 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
26851167 26851167 PRJNA1196384_S_NODE_7541_length_156_cov_1.638655_g7477_i0 PRJNA1196384 7541 156 1.638655 2.5563018 Acanthosepion pharaonis 158019 Mollusca Mollusca 86.7 3.47e-18   NR CAE1301636.1 158019 g7477 i0 80.4 0.980769230769231 51 10 98.1 0 154 2 293 343 CAE1301636.1 GDI1_2 [Acanthosepion pharaonis] diamond 153 86.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
27091469 27091469 PRJNA1196384_S_NODE_5462_length_176_cov_1.028777_g5398_i0 PRJNA1196384 5462 176 1.028777 1.81064752 Mollusca 6447 Mollusca Mollusca 80.1 1.02e-15   NR CAI9715682.1 6645 g5398 i0 66.1 2.86363636363636 56 19 95.5 0 172 5 544 599 CAI9715682.1 sorting-associated 35-like [Octopus vulgaris] diamond 504 80.9 0.990111248454882 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris
28083078 28083078 PRJNA1196384_S_NODE_3305_length_215_cov_1.325843_g3241_i0 PRJNA1196384 3305 215 1.325843 2.85056245 Bradybaena similaris 145626 Mollusca Mollusca 49.3 1.93e-5   NR BFZ16647.1 145626 g3241 i0 60 0.488372093023256 35 14 48.8 0 208 104 68 102 BFZ16647.1 hypothetical protein BsWGS_19686 [Bradybaena similaris] diamond 105 49.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
28083079 28083079 PRJNA1196384_S_NODE_4225_length_194_cov_1.382166_g4161_i0 PRJNA1196384 4225 194 1.382166 2.68140204 Potamilus streckersoni 2493646 Mollusca Mollusca 53.1 4.12e-6   NR KAK3598520.1 2493646 g4161 i0 39.1 0.989690721649485 64 35 95.9 2 189 4 557 618 KAK3598520.1 hypothetical protein CHS0354_005801 [Potamilus streckersoni] diamond 192 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
28323027 28323027 PRJNA1196384_S_NODE_3326_length_214_cov_4.237288_g3262_i0 PRJNA1196384 3326 214 4.237288 9.06779632 Mytilus 6548 Mollusca Mollusca 114 4.46e-29   NR XP_063424927.1 6551 g3262 i0 80.3 18.6728971962617 71 14 99.5 0 214 2 42 112 XP_063424927.1 large ribosomal subunit protein eL8-like [Mytilus trossulus] diamond 3996 114 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
28733697 28733697 PRJNA1196384_S_NODE_4447_length_190_cov_1.274510_g4383_i0 PRJNA1196384 4447 190 1.27451 2.421569 Metazoa 33208 Mollusca Mollusca 42.7 0.0193   NR KAH9523908.1 55810 g4383 i0 37.1 9.3 62 32 88.4 2 1 168 2690 2750 KAH9523908.1 hypothetical protein Btru_047381 [Bulinus truncatus] diamond 1767 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
29396642 29396642 PRJNA1196384_S_NODE_3669_length_206_cov_1.591716_g3605_i0 PRJNA1196384 3669 206 1.591716 3.27893496 Metazoa 33208 Mollusca Mollusca 51.2 2.3e-5   NR XP_050407696.1 6465 g3605 i0 43.5 5.97087378640777 69 38 99 1 206 3 271 339 XP_050407696.1 legumain [Patella vulgata] diamond 1230 51.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
29491306 29491306 PRJNA1196384_S_NODE_3650_length_206_cov_4.970414_g3586_i0 PRJNA1196384 3650 206 4.970414 10.23905284 Mollusca 6447 Mollusca Mollusca 70.5 2.01e-13   NR XP_050403034.1 6465 g3586 i0 77.3 1.92233009708738 44 10 64.1 0 75 206 12 55 XP_050403034.1 40S ribosomal protein S12 [Patella vulgata] diamond 396 71.2 0.990168539325843 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
29585798 29585798 PRJNA1196384_S_NODE_3990_length_199_cov_0.962963_g3926_i0 PRJNA1196384 3990 199 0.962963 1.91629637 Metazoa 33208 Mollusca Mollusca 42.7 0.0213   NR OWF35520.1 6573 g3926 i0 34.3 3.76884422110553 67 42 98 2 198 4 545 611 OWF35520.1 Protein DD3-3 [Mizuhopecten yessoensis] diamond 750 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
29883099 29883099 PRJNA1196384_S_NODE_5431_length_176_cov_1.669065_g5367_i0 PRJNA1196384 5431 176 1.669065 2.9375544 Liolophura japonica 13599 Mollusca Mollusca 84.3 6.42e-18   NR XP_064603681.1 13599 g5367 i0 60.3 0.988636363636364 58 23 98.9 0 176 3 173 230 XP_064603681.1 countin-1-like [Liolophura japonica] diamond 174 84.3 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
31734777 31734777 PRJNA1196384_S_NODE_3957_length_199_cov_2.018519_g3893_i0 PRJNA1196384 3957 199 2.018519 4.01685281 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 2.6199999999999996e-31   NR KAI8770767.1 6526 g3893 i0 89.2 10.7788944723618 65 7 98 0 3 197 427 491 KAI8770767.1 eukaryotic initiation factor 4A-I [Biomphalaria glabrata] diamond 2145 124 0.991935483870968 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
32159039 32159039 PRJNA1196384_S_NODE_2698_length_236_cov_1.693467_g2634_i0 PRJNA1196384 2698 236 1.693467 3.99658212 Mytilus coruscus 42192 Mollusca Mollusca 51.2 3.42e-5   NR CAC5413870.1 42192 g2634 i0 42.2 1.5635593220339 45 26 57.2 0 159 25 337 381 CAC5413870.1 unnamed protein product [Mytilus coruscus] diamond 369 51.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
32462741 32462741 PRJNA1196384_S_NODE_7579_length_156_cov_1.285714_g7515_i0 PRJNA1196384 7579 156 1.285714 2.00571384 Metazoa 33208 Mollusca Mollusca 43.5 0.00605   NR KAK7493863.1 370345 g7515 i0 40.8 2.76923076923077 49 29 94.2 0 8 154 616 664 KAK7493863.1 hypothetical protein BaRGS_00015004 [Batillaria attramentaria] diamond 432 43.9 0.990888382687927 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;