RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196384", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28733695 28733695 PRJNA1196384_S_NODE_3527_length_209_cov_2.680233_g3463_i0 PRJNA1196384 3527 209 2.680233 5.60168697 Opisthokonta 33154 Hemichordata other_Eukaryota 95.9 1.11e-22   NR XP_070581401.1 63121 g3463 i0 63.2 5.87081339712919 68 25 97.6 0 208 5 104 171 XP_070581401.1 rho GDP-dissociation inhibitor 1-like [Ptychodera flava] diamond 1227 96.3 0.995846313603323 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
31007717 31007717 PRJNA1196384_S_NODE_2074_length_271_cov_2.136752_g2010_i0 PRJNA1196384 2074 271 2.136752 5.79059792 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 138 1.94e-38   NR XP_070539404.1 63121 g2010 i0 70 9.96309963099631 90 27 99.6 0 270 1 64 153 XP_070539404.1 large ribosomal subunit protein uL2 [Ptychodera flava] diamond 2700 138 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;