RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196384", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30217723 30217723 PRJNA1196384_S_NODE_2432_length_249_cov_1.363208_g2368_i0 PRJNA1196384 2432 249 1.363208 3.39438792 Fungi 4751 Fungi Fungi 154 4.55e-44   NR KAJ1497899.1 945690 g2368 i0 87.8 5.92771084337349 82 10 98.8 0 3 248 210 291 KAJ1497899.1 guanine nucleotide-binding protein subunit beta 1 [Coelomomyces lativittatus] diamond 1476 154 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
32443948 32443948 PRJNA1196384_S_NODE_3679_length_206_cov_0.917160_g3615_i0 PRJNA1196384 3679 206 0.91716 1.8893496 Catenaria anguillulae PL171 765915 Fungi Fungi 60.8 6.05e-9   NR ORZ30136.1 765915 g3615 i0 51.9 0.757281553398058 52 25 75.7 0 206 51 95 146 ORZ30136.1 ubiquitin-conjugating enzyme/RWD-like protein [Catenaria anguillulae PL171] diamond 156 60.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;