RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1196384", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4871236 4871236 PRJNA1196384_S_NODE_64_length_1118_cov_4.340426_g40_i0 PRJNA1196384 64 1118 4.340426 48.52596268 Fimbriimonas 1005038 Bacteria Bacteria 1458 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g40 i0 90.25 211.519677996422 1118 105 100 3 1 1118 29227 28114 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 236479 1458 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
18894616 18894616 PRJNA1196384_S_NODE_4675_length_186_cov_3.825503_g4611_i0 PRJNA1196384 4675 186 3.825503 7.11543558 Fimbriimonas 1005038 Bacteria Bacteria 333 5.069999999999999e-87   NTclustered gi|663071213|gb|CP007139.1| 661478 g4611 i0 98.925 437.279569892473 186 2 100 0 1 186 27008 27193 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 81334 333 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;