RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1196384", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 4 ✖

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA1196384 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16345658 16345658 PRJNA1196384_S_NODE_2273_length_257_cov_1.900000_g2209_i0 PRJNA1196384 2273 257 1.9 4.883 Naegleria 5761 Heterolobosea other_Eukaryota 326 1.25e-84   NTclustered gi|2031924593|emb|OD955803.1| 5763 g2209 i0 89.494 43.2256809338521 257 27 100 0 1 257 5245 5501 Naegleria fowleri Karachi_NF001 strain blastn 11109 326 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27736177 27736177 PRJNA1196384_S_NODE_7304_length_158_cov_0.958678_g7240_i0 PRJNA1196384 7304 158 0.958678 1.51471124 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 89.4 1.88e-20   NR XP_044566917.1 5763 g7240 i0 71.2 3.9493670886076 52 15 98.7 0 158 3 117 168 XP_044566917.1 uncharacterized protein FDP41_012065 [Naegleria fowleri] diamond 624 89.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29693088 29693088 PRJNA1196384_S_NODE_3830_length_202_cov_1.866667_g3766_i0 PRJNA1196384 3830 202 1.866667 3.77066734 Acrasis kona 1008807 Heterolobosea other_Eukaryota 67.8 1.56e-12   NR KAL0483908.1 1008807 g3766 i0 48.5 0.98019801980198 66 34 98 0 3 200 10 75 KAL0483908.1 profilin [Acrasis kona] diamond 198 67.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30281426 30281426 PRJNA1196384_S_NODE_6772_length_162_cov_1.464000_g6708_i0 PRJNA1196384 6772 162 1.464 2.37168 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 83.2 1.26e-18   NR XP_044557059.1 5763 g6708 i0 75.5 5.90740740740741 53 13 98.1 0 159 1 74 126 XP_044557059.1 uncharacterized protein FDP41_009247 [Naegleria fowleri] diamond 957 83.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;