contig_metadata
40 rows where bioproject = "PRJNA1195551" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 322530 | 322530 | PRJNA1195551_S_NODE_13521_length_263_cov_4.995327_g13168_i0 | PRJNA1195551 | 13521 | 263 | 4.995327 | 13.13771001 | Pestivirus bovis | 3052619 | Viruses | Viruses | 464 | 2.5999999999999993e-126 | NTclustered | gi|1129880595|gb|KX170665.1| | 11099 | g13168 | i0 | 98.479 | 99.9961977186312 | 263 | 4 | 100 | 0 | 1 | 263 | 1044 | 782 | Bovine viral diarrhea virus 1 isolate V070 NS5B gene, partial cds | blastn | 26299 | 464 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 322598 | 322598 | PRJNA1195551_S_NODE_29001_length_188_cov_2.410072_g28648_i0 | PRJNA1195551 | 29001 | 188 | 2.410072 | 4.53093536 | Pestivirus bovis | 3052619 | Viruses | Viruses | 320 | 4e-83 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g28648 | i0 | 97.34 | 99.936170212766 | 188 | 5 | 100 | 0 | 1 | 188 | 2192 | 2005 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 18788 | 320 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1043130 | 1043130 | PRJNA1195551_S_NODE_861_length_1024_cov_12.625641_g702_i0 | PRJNA1195551 | 861 | 1024 | 12.625641 | 129.28656384 | Pestivirus | 11095 | Viruses | Viruses | 1720 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g702 | i0 | 96.976 | 100.05078125 | 1025 | 29 | 100 | 2 | 1 | 1024 | 9451 | 10474 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 102452 | 1720 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1597150 | 1597150 | PRJNA1195551_S_NODE_14222_length_258_cov_2.889952_g13869_i0 | PRJNA1195551 | 14222 | 258 | 2.889952 | 7.45607616 | Pestivirus tauri | 3052626 | Viruses | Viruses | 438 | 1.5399999999999995e-118 | NTclustered | gi|1003702981|gb|KT875160.1| | 54315 | g13869 | i0 | 97.287 | 97.6705426356589 | 258 | 7 | 100 | 0 | 1 | 258 | 281 | 538 | Bovine viral diarrhea virus 2 isolate 75W polyprotein gene, complete cds | blastn | 25199 | 438 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 2318463 | 2318463 | PRJNA1195551_S_NODE_3162_length_474_cov_7.430588_g2811_i0 | PRJNA1195551 | 3162 | 474 | 7.430588 | 35.22098712 | Pestivirus | 11095 | Viruses | Viruses | 793 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g2811 | i0 | 96.835 | 99.9873417721519 | 474 | 15 | 100 | 0 | 1 | 474 | 4443 | 4916 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 47394 | 793 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2873326 | 2873326 | PRJNA1195551_S_NODE_1223_length_801_cov_5.224734_g974_i0 | PRJNA1195551 | 1223 | 801 | 5.224734 | 41.85011934 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1096 | 0 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g974 | i0 | 96.257 | 100.124843945069 | 668 | 25 | 100 | 0 | 1 | 668 | 11956 | 11289 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 80200 | 1096 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3593571 | 3593571 | PRJNA1195551_S_NODE_9323_length_302_cov_4.758893_g8970_i0 | PRJNA1195551 | 9323 | 302 | 4.758893 | 14.37185686 | Pestivirus | 11095 | Viruses | Viruses | 508 | 1.39e-139 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g8970 | i0 | 97.02 | 99.771523178808 | 302 | 9 | 100 | 0 | 1 | 302 | 5562 | 5261 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 30131 | 508 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4871188 | 4871188 | PRJNA1195551_S_NODE_7024_length_335_cov_11.506993_g6671_i0 | PRJNA1195551 | 7024 | 335 | 11.506993 | 38.54842655 | Pestivirus | 11095 | Viruses | Viruses | 536 | 7.149999999999998e-148 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g6671 | i0 | 95.522 | 99.844776119403 | 335 | 15 | 100 | 0 | 1 | 335 | 9739 | 9405 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 33448 | 536 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5425748 | 5425748 | PRJNA1195551_S_NODE_26585_length_196_cov_2.476190_g26232_i0 | PRJNA1195551 | 26585 | 196 | 2.47619 | 4.8533324 | Pestivirus tauri | 3052626 | Viruses | Viruses | 351 | 1.49e-92 | NTclustered | gi|1129879363|gb|KX170049.1| | 54315 | g26232 | i0 | 98.98 | 99.734693877551 | 196 | 2 | 100 | 0 | 1 | 196 | 521 | 326 | Bovine viral diarrhea virus 2 isolate V081 E1 gene, partial cds | blastn | 19548 | 351 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 6700502 | 6700502 | PRJNA1195551_S_NODE_36346_length_169_cov_3.058333_g35993_i0 | PRJNA1195551 | 36346 | 169 | 3.058333 | 5.16858277 | Pestivirus tauri | 3052626 | Viruses | Viruses | 296 | 5.9e-76 | NTclustered | gi|1003702981|gb|KT875160.1| | 54315 | g35993 | i0 | 98.225 | 99.9881656804734 | 169 | 3 | 100 | 0 | 1 | 169 | 6414 | 6582 | Bovine viral diarrhea virus 2 isolate 75W polyprotein gene, complete cds | blastn | 16898 | 296 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 7420995 | 7420995 | PRJNA1195551_S_NODE_3446_length_455_cov_15.706897_g3095_i0 | PRJNA1195551 | 3446 | 455 | 15.706897 | 71.46638135 | Pestivirus | 11095 | Viruses | Viruses | 774 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g3095 | i0 | 97.363 | 99.9714285714286 | 455 | 12 | 100 | 0 | 1 | 455 | 1944 | 1490 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 45487 | 780 | 0.992307692307692 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7421014 | 7421014 | PRJNA1195551_S_NODE_5326_length_374_cov_18.800000_g4973_i0 | PRJNA1195551 | 5326 | 374 | 18.8 | 70.312 | Pestivirus | 11095 | Viruses | Viruses | 652 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g4973 | i0 | 98.128 | 100 | 374 | 7 | 100 | 0 | 1 | 374 | 10654 | 10281 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 37400 | 652 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7975971 | 7975971 | PRJNA1195551_S_NODE_6047_length_354_cov_29.937705_g5694_i0 | PRJNA1195551 | 6047 | 354 | 29.937705 | 105.9794757 | Pestivirus bovis | 3052619 | Viruses | Viruses | 538 | 2.109999999999999e-148 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g5694 | i0 | 94.068 | 99.6525423728814 | 354 | 21 | 100 | 0 | 1 | 354 | 86 | 439 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 35277 | 538 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7975983 | 7975983 | PRJNA1195551_S_NODE_9807_length_297_cov_6.274194_g9454_i0 | PRJNA1195551 | 9807 | 297 | 6.274194 | 18.63435618 | Pestivirus bovis | 3052619 | Viruses | Viruses | 499 | 8.2e-137 | NTclustered | gi|378753668|gb|JN380088.1| | 981676 | g9454 | i0 | 96.97 | 99.8350168350168 | 297 | 9 | 100 | 0 | 1 | 297 | 4954 | 4658 | Bovine viral diarrhea virus type 1b strain PJ polyprotein gene, complete cds | blastn | 29651 | 499 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9250401 | 9250401 | PRJNA1195551_S_NODE_1008_length_909_cov_13.961628_g803_i0 | PRJNA1195551 | 1008 | 909 | 13.961628 | 126.91119852 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1384 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g803 | i0 | 94.254 | 99.7887788778878 | 905 | 52 | 99 | 0 | 3 | 907 | 2751 | 3655 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 90708 | 1384 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9250523 | 9250523 | PRJNA1195551_S_NODE_5568_length_367_cov_19.257862_g5215_i0 | PRJNA1195551 | 5568 | 367 | 19.257862 | 70.67635354 | Pestivirus bovis | 3052619 | Viruses | Viruses | 623 | 5.889999999999999e-174 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g5215 | i0 | 97.275 | 100.653950953678 | 367 | 10 | 100 | 0 | 1 | 367 | 645 | 279 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 36940 | 623 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9971163 | 9971163 | PRJNA1195551_S_NODE_12288_length_273_cov_4.250000_g11935_i0 | PRJNA1195551 | 12288 | 273 | 4.25 | 11.6025 | Pestivirus | 11095 | Viruses | Viruses | 449 | 7.61e-122 | NTclustered | gi|1628570|gb|U63512.1|BVU63512 | 11099 | g11935 | i0 | 96.337 | 99.970695970696 | 273 | 10 | 100 | 0 | 1 | 273 | 3743 | 3471 | Bovine viral diarrhea virus cytopathogenic strain CP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 27292 | 449 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9971191 | 9971191 | PRJNA1195551_S_NODE_20908_length_219_cov_2.564706_g20555_i0 | PRJNA1195551 | 20908 | 219 | 2.564706 | 5.61670614 | Pestivirus | 11095 | Viruses | Viruses | 333 | 6.179999999999999e-87 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g20555 | i0 | 94.064 | 99.9086757990868 | 219 | 13 | 100 | 0 | 1 | 219 | 2066 | 1848 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 21880 | 333 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9971251 | 9971251 | PRJNA1195551_S_NODE_9108_length_305_cov_2.597656_g8755_i0 | PRJNA1195551 | 9108 | 305 | 2.597656 | 7.9228508 | Pestivirus | 11095 | Viruses | Viruses | 531 | 2.9999999999999993e-146 | NTclustered | gi|386285714|gb|JQ418635.1| | 54315 | g8755 | i0 | 98.033 | 99.1114754098361 | 305 | 6 | 100 | 0 | 1 | 305 | 8931 | 9235 | Bovine viral diarrhea virus 2 isolate 08Q723 polyprotein gene, complete cds | blastn | 30229 | 531 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 11801072 | 11801072 | PRJNA1195551_S_NODE_19050_length_228_cov_4.944134_g18697_i0 | PRJNA1195551 | 19050 | 228 | 4.944134 | 11.27262552 | Pestivirus bovis | 3052619 | Viruses | Viruses | 399 | 6.299999999999999e-107 | NTclustered | gi|1129880363|gb|KX170549.1| | 11099 | g18697 | i0 | 98.246 | 99.969298245614 | 228 | 4 | 100 | 0 | 1 | 228 | 569 | 796 | Bovine viral diarrhea virus 1 isolate V070 NS4B gene, partial cds | blastn | 22793 | 399 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11801147 | 11801147 | PRJNA1195551_S_NODE_4910_length_388_cov_14.707965_g4557_i0 | PRJNA1195551 | 4910 | 388 | 14.707965 | 57.0669042 | Pestivirus bovis | 3052619 | Viruses | Viruses | 662 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g4557 | i0 | 97.423 | 99.9896907216495 | 388 | 10 | 100 | 0 | 1 | 388 | 7523 | 7136 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 38796 | 662 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13076122 | 13076122 | PRJNA1195551_S_NODE_10091_length_294_cov_4.506122_g9738_i0 | PRJNA1195551 | 10091 | 294 | 4.506122 | 13.24799868 | Pestivirus bovis | 3052619 | Viruses | Viruses | 494 | 3.77e-135 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g9738 | i0 | 96.939 | 99.7993197278912 | 294 | 9 | 100 | 0 | 1 | 294 | 11309 | 11016 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 29341 | 494 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13076246 | 13076246 | PRJNA1195551_S_NODE_931_length_961_cov_25.601974_g696_i1 | PRJNA1195551 | 931 | 961 | 25.601974 | 246.03497014 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1609 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g696 | i1 | 96.976 | 95.4640998959417 | 959 | 28 | 99 | 1 | 1 | 959 | 1025 | 68 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 91741 | 1609 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13796475 | 13796475 | PRJNA1195551_S_NODE_3851_length_431_cov_41.193717_g3498_i0 | PRJNA1195551 | 3851 | 431 | 41.193717 | 177.54492027 | Pestivirus | 11095 | Viruses | Viruses | 736 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g3498 | i0 | 97.448 | 99.9907192575406 | 431 | 11 | 100 | 0 | 1 | 431 | 10711 | 10281 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 43096 | 736 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14351548 | 14351548 | PRJNA1195551_S_NODE_1432_length_726_cov_5.047267_g1154_i0 | PRJNA1195551 | 1432 | 726 | 5.047267 | 36.64315842 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1225 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g1154 | i0 | 97.107 | 99.7892561983471 | 726 | 21 | 100 | 0 | 1 | 726 | 8328 | 9053 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 72447 | 1225 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14351623 | 14351623 | PRJNA1195551_S_NODE_43012_length_156_cov_3.859813_g42659_i0 | PRJNA1195551 | 43012 | 156 | 3.859813 | 6.02130828 | Pestivirus bovis | 3052619 | Viruses | Viruses | 283 | 4.1899999999999994e-72 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g42659 | i0 | 99.359 | 98.8974358974359 | 156 | 1 | 100 | 0 | 1 | 156 | 11152 | 11307 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 15428 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14351627 | 14351627 | PRJNA1195551_S_NODE_4432_length_405_cov_17.365169_g4079_i0 | PRJNA1195551 | 4432 | 405 | 17.365169 | 70.32893445 | Pestivirus bovis | 3052619 | Viruses | Viruses | 682 | 0 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g4079 | i0 | 97.037 | 99.8518518518518 | 405 | 12 | 100 | 0 | 1 | 405 | 10088 | 9684 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 40440 | 682 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15070825 | 15070825 | PRJNA1195551_S_NODE_4312_length_410_cov_14.263158_g3959_i0 | PRJNA1195551 | 4312 | 410 | 14.263158 | 58.4789478 | Pestivirus | 11095 | Viruses | Viruses | 636 | 8.549999999999998e-178 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g3959 | i0 | 94.634 | 100.89512195122 | 410 | 22 | 100 | 0 | 1 | 410 | 1024 | 615 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 41367 | 636 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15070831 | 15070831 | PRJNA1195551_S_NODE_4852_length_390_cov_7.041056_g4499_i0 | PRJNA1195551 | 4852 | 390 | 7.041056 | 27.4601184 | Pestivirus | 11095 | Viruses | Viruses | 625 | 1.7499999999999995e-174 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g4499 | i0 | 95.641 | 97.8641025641026 | 390 | 16 | 100 | 1 | 1 | 390 | 8190 | 7802 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 38167 | 625 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15625303 | 15625303 | PRJNA1195551_S_NODE_13033_length_267_cov_3.577982_g12680_i0 | PRJNA1195551 | 13033 | 267 | 3.577982 | 9.55321194 | Pestivirus tauri | 3052626 | Viruses | Viruses | 477 | 3.3999999999999993e-130 | NTclustered | gi|737515360|dbj|AB894423.1| | 54315 | g12680 | i0 | 98.876 | 95.4119850187266 | 267 | 3 | 100 | 0 | 1 | 267 | 339 | 605 | Bovine viral diarrhea virus 2 genomic RNA, complete genome, strain: GBK_E+ | blastn | 25475 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 16899741 | 16899741 | PRJNA1195551_S_NODE_8594_length_311_cov_8.213740_g8241_i0 | PRJNA1195551 | 8594 | 311 | 8.21374 | 25.5447314 | Pestivirus bovis | 3052619 | Viruses | Viruses | 542 | 1.41e-149 | NTclustered | gi|1129880115|gb|KX170425.1| | 11099 | g8241 | i0 | 98.071 | 99.9549839228296 | 311 | 6 | 100 | 0 | 1 | 311 | 692 | 1002 | Bovine viral diarrhea virus 1 isolate V060 NS3 gene, partial cds | blastn | 31086 | 542 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18174245 | 18174245 | PRJNA1195551_S_NODE_5835_length_360_cov_5.893891_g5482_i0 | PRJNA1195551 | 5835 | 360 | 5.893891 | 21.2180076 | Pestivirus bovis | 3052619 | Viruses | Viruses | 610 | 4.489999999999999e-170 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g5482 | i0 | 97.222 | 100 | 360 | 10 | 100 | 0 | 1 | 360 | 5048 | 5407 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 36000 | 610 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18174253 | 18174253 | PRJNA1195551_S_NODE_855_length_1028_cov_41.494382_g696_i0 | PRJNA1195551 | 855 | 1028 | 41.494382 | 426.56224696 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1703 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g696 | i0 | 96.592 | 94.8998054474708 | 1027 | 35 | 99 | 0 | 1 | 1027 | 1098 | 72 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 97557 | 1703 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20723927 | 20723927 | PRJNA1195551_S_NODE_19877_length_224_cov_3.611429_g19524_i0 | PRJNA1195551 | 19877 | 224 | 3.6114289999999998 | 8.08960096 | Pestivirus tauri | 3052626 | Viruses | Viruses | 370 | 4.84e-98 | NTclustered | gi|1540352885|gb|MH231134.1| | 54315 | g19524 | i0 | 96.429 | 99.4910714285714 | 224 | 8 | 100 | 0 | 1 | 224 | 5449 | 5672 | Bovine viral diarrhea virus 2 isolate B9497 polyprotein gene, complete cds | blastn | 22286 | 370 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 20723937 | 20723937 | PRJNA1195551_S_NODE_22897_length_210_cov_5.484472_g22544_i0 | PRJNA1195551 | 22897 | 210 | 5.484472 | 11.5173912 | Pestivirus tauri | 3052626 | Viruses | Viruses | 320 | 4.58e-83 | NTclustered | gi|1003702981|gb|KT875160.1| | 54315 | g22544 | i0 | 95.074 | 95.9571428571429 | 203 | 10 | 97 | 0 | 8 | 210 | 2251 | 2049 | Bovine viral diarrhea virus 2 isolate 75W polyprotein gene, complete cds | blastn | 20151 | 320 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 21445016 | 21445016 | PRJNA1195551_S_NODE_3177_length_473_cov_4.568396_g2826_i0 | PRJNA1195551 | 3177 | 473 | 4.568396 | 21.60851308 | Pestivirus | 11095 | Viruses | Viruses | 791 | 0 | NTclustered | gi|404363563|gb|JX419398.1| | 11099 | g2826 | i0 | 96.829 | 99.9873150105708 | 473 | 15 | 100 | 0 | 1 | 473 | 6398 | 5926 | Bovine viral diarrhea virus 1 polyprotein gene, complete cds | blastn | 47294 | 791 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21999302 | 21999302 | PRJNA1195551_S_NODE_16118_length_245_cov_7.397959_g15765_i0 | PRJNA1195551 | 16118 | 245 | 7.397959 | 18.12499955 | Pestivirus tauri | 3052626 | Viruses | Viruses | 425 | 1.1299999999999999e-114 | NTclustered | gi|216360834|gb|FJ431190.1| | 54315 | g15765 | i0 | 97.959 | 99.5183673469388 | 245 | 5 | 100 | 0 | 1 | 245 | 257 | 13 | Bovine viral diarrhea virus 2 isolate 53100 polyprotein gene, partial cds | blastn | 24382 | 425 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 24548745 | 24548745 | PRJNA1195551_S_NODE_9980_length_295_cov_5.910569_g9627_i0 | PRJNA1195551 | 9980 | 295 | 5.910569 | 17.43617855 | Pestivirus bovis | 3052619 | Viruses | Viruses | 496 | 1.05e-135 | NTclustered | gi|59624984|gb|AY911671.1| | 312034 | g9627 | i0 | 96.949 | 99.9627118644068 | 295 | 9 | 100 | 0 | 1 | 295 | 831 | 1125 | Bovine pestivirus Ind S1456 polyprotein gene, partial cds | blastn | 29489 | 496 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25269325 | 25269325 | PRJNA1195551_S_NODE_4400_length_406_cov_41.694678_g4047_i0 | PRJNA1195551 | 4400 | 406 | 41.694678 | 169.28039268 | Pestivirus | 11095 | Viruses | Viruses | 662 | 0 | NTclustered | gi|800924334|gb|KP941592.1| | 11099 | g4047 | i0 | 96.059 | 99.9975369458128 | 406 | 16 | 100 | 0 | 1 | 406 | 4402 | 3997 | Bovine viral diarrhea virus 1 strain USMARC-55926 polyprotein gene, complete cds | blastn | 40599 | 662 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 27167103 | 27167103 | PRJNA1195551_S_NODE_7622_length_325_cov_12.068841_g7269_i0 | PRJNA1195551 | 7622 | 325 | 12.068841 | 39.22373325 | Nanning tick virus 2 | 2972366 | Viruses | Viruses | 121 | 2.86e-29 | NR | UYL95418.1 | 2972366 | g7269 | i0 | 52.8 | 0.996923076923077 | 108 | 51 | 99.7 | 0 | 325 | 2 | 266 | 373 | UYL95418.1 MAG: RNA-dependent RNA polymerase [Nanning tick virus 2] | diamond | 324 | 121 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Tymoviridae | Nanning tick virus 2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;