RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195551", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1195551 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24548675 24548675 PRJNA1195551_S_NODE_20560_length_221_cov_1.209302_g20207_i0 PRJNA1195551 20560 221 1.209302 2.67255742 Betacoronavirus pandemicum 3418604 Viruses Viruses 87.9 5.37e-13   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g20207 i0 93.333 24.0497737556561 60 2 27 1 2 61 29974 29917 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 5315 87.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25269260 25269260 PRJNA1195551_S_NODE_18340_length_232_cov_3.464481_g17987_i0 PRJNA1195551 18340 232 3.464481 8.03759592 Viruses 10239 Viruses Viruses 390 3.87e-104   NTclustered gi|1635478545|gb|MH536110.1| 2575371 g17987 i0 96.983 5.875 232 7 100 0 1 232 6447 6678 Dicistroviridae TZ-2, complete genome blastn 1363 390 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae TZ-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;