RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195551", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1195551 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6700409 6700409 PRJNA1195551_S_NODE_14526_length_256_cov_1.004831_g14173_i0 PRJNA1195551 14526 256 1.004831 2.57236736 Oscarella lobularis 121494 Porifera other_Eukaryota 52.8 0.023   NTclustered gi|2746776208|ref|XM_065971982.1| 121494 g14173 i0 100 0.21875 28 0 11 0 120 147 1292 1319 PREDICTED: Oscarella lobularis PDZ domain-containing protein 7-like (LOC136184965), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
27009051 27009051 PRJNA1195551_S_NODE_7342_length_330_cov_4.092527_g6989_i0 PRJNA1195551 7342 330 4.092527 13.5053391 Halichondria panicea 6063 Porifera other_Eukaryota 73.6 2.22e-13   NR XP_064404868.1 6063 g6989 i0 44.3 2.19090909090909 88 44 76.4 2 330 79 111 197 XP_064404868.1 large ribosomal subunit protein uL13-like [Halichondria panicea] diamond 723 73.6 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;