RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1195551", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA1195551 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9250441 9250441 PRJNA1195551_S_NODE_16848_length_240_cov_31.314136_g16495_i0 PRJNA1195551 16848 240 31.314136 75.1539264 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g16495 i0 92.5 0.529166666666667 40 2 17 1 198 237 84732007 84732045 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 127 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20723976 20723976 PRJNA1195551_S_NODE_42997_length_156_cov_4.037383_g42644_i0 PRJNA1195551 42997 156 4.037383 6.29831748 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.013   NTclustered gi|2912994531|dbj|AP039599.1| 145626 g42644 i0 100 0.179487179487179 28 0 18 0 75 102 9430589 9430616 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 18, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23274794 23274794 PRJNA1195551_S_NODE_16899_length_240_cov_5.586387_g16546_i0 PRJNA1195551 16899 240 5.586387 13.4073288 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g16546 i0 92.5 0.283333333333333 40 2 17 1 108 147 57745369 57745331 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 68 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23274846 23274846 PRJNA1195551_S_NODE_3319_length_463_cov_5.589372_g2968_i0 PRJNA1195551 3319 463 5.589372 25.87879236 Bradybaena similaris 145626 Mollusca Mollusca 60.2 2.69e-4   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g2968 i0 97.222 0.704103671706264 36 0 8 1 230 264 53011034 53011069 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 326 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24548681 24548681 PRJNA1195551_S_NODE_21500_length_216_cov_12.233533_g21147_i0 PRJNA1195551 21500 216 12.233533 26.42443128 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.019   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g21147 i0 100 0.12962962962963 28 0 13 0 96 123 8953149 8953122 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
29648860 29648860 PRJNA1195551_S_NODE_39570_length_164_cov_0.904348_g39217_i0 PRJNA1195551 39570 164 0.904348 1.48313072 Mytilus 6548 Mollusca Mollusca 59.3 1.62e-8   NR XP_052058775.1 6549 g39217 i0 50 12.8231707317073 54 27 98.8 0 2 163 72 125 XP_052058775.1 uncharacterized protein LOC127699077 [Mytilus californianus] diamond 2103 59.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
31020409 31020409 PRJNA1195551_S_NODE_36335_length_169_cov_3.258333_g35982_i0 PRJNA1195551 36335 169 3.258333 5.50658277 Haliotis rubra 36100 Mollusca Mollusca 41.2 0.048   NR XP_046549239.1 36100 g35982 i0 61.5 0.461538461538462 26 3 33.7 1 98 154 2 27 XP_046549239.1 coadhesin-like [Haliotis rubra] diamond 78 41.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;