RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1195374" and tax_phylum = "Uroviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1195374 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15625014 15625014 PRJNA1195374_P_NODE_73573_length_249_cov_1.113636_g73229_i0 PRJNA1195374 73573 249 1.113636 2.77295364 Xanthomonas phage Kintu 3120010 Viruses Viruses 326 1.2e-84   NTclustered gi|2677115081|gb|PP313117.1| 3120010 g73229 i0 90.323 0.995983935742972 248 24 99 0 1 248 29614 29861 Xanthomonas phage Kintu, complete genome blastn 248 326 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Xanthomonas phage Kintu
20723390 20723390 PRJNA1195374_P_NODE_63237_length_271_cov_1.368687_g62893_i0 PRJNA1195374 63237 271 1.368687 3.70914177 Caudoviricetes sp. 2832643 Viruses Viruses 228 3.8499999999999985e-55   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g62893 i0 82.051 65.0811808118081 273 44 100 4 1 271 18259 17990 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 17637 228 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27577943 27577943 PRJNA1195374_P_NODE_66884_length_261_cov_1.638298_g66540_i0 PRJNA1195374 66884 261 1.638298 4.27595778 Caudoviricetes sp. 2832643 Viruses Viruses 43.9 0.00773   NR DAS73008.1 2832643 g66540 i0 32.9 0.873563218390805 76 47 87.4 1 4 231 55 126 DAS73008.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 228 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27767620 27767620 PRJNA1195374_P_NODE_75224_length_248_cov_0.880000_g74880_i0 PRJNA1195374 75224 248 0.88 2.1824 Ralstonia phage RsoM2USA 2070027 Viruses Viruses 101 3.9e-24   NR AVH85297.1 2070027 g74880 i0 57.3 0.991935483870968 82 35 99.2 0 246 1 41 122 AVH85297.1 hypothetical protein RsoM2USA_369 [Ralstonia phage RsoM2USA] diamond 246 101 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Ralstonia phage RsoM2USA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;