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contig_metadata

32 rows where bioproject = "PRJNA1195374" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1195374 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1595904 1595904 PRJNA1195374_P_NODE_23782_length_465_cov_2.512755_g23438_i0 PRJNA1195374 23782 465 2.512755 11.68431075 Desulforhabdus sp. 2502061 Bacteria Bacteria 260 5.789999999999999e-82   NR MDY0042277.1 2502061 g23438 i0 76 10.9161290322581 154 37 99.4 0 3 464 75 228 MDY0042277.1 catalase [Desulforhabdus sp.] diamond 5076 260 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulforhabdus Desulforhabdus sp.
4149276 4149276 PRJNA1195374_P_NODE_79564_length_245_cov_0.895349_g79220_i0 PRJNA1195374 79564 245 0.895349 2.19360505 Desulfopila aestuarii 231440 Bacteria Bacteria 120 3.5899999999999998e-31   NR WP_407642588.1 231440 g79220 i0 77.5 0.979591836734694 80 18 98 0 4 243 99 178 WP_407642588.1 NAD(P)-dependent oxidoreductase [Desulfopila aestuarii] diamond 240 120 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfopila Desulfopila aestuarii
5424950 5424950 PRJNA1195374_P_NODE_50045_length_311_cov_0.970588_g49701_i0 PRJNA1195374 50045 311 0.970588 3.01852868 Pseudodesulfovibrio thermohalotolerans 2880651 Bacteria Bacteria 89.8 2.22e-13   NTclustered gi|2489621199|gb|CP120635.1| 2880651 g49701 i0 94.737 18.5659163987138 57 3 18 0 13 69 1248073 1248129 Pseudodesulfovibrio thermohalotolerans strain MCM B-1480 chromosome, complete genome blastn 5774 89.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio thermohalotolerans
7420464 7420464 PRJNA1195374_P_NODE_21606_length_488_cov_2.106024_g21263_i0 PRJNA1195374 21606 488 2.106024 10.27739712 Desulfobacterales bacterium 2044940 Bacteria Bacteria 127 9.34e-31   NR MCU0556007.1 2044940 g21263 i0 57.9 3.79303278688525 107 44 65.8 1 36 356 445 550 MCU0556007.1 glucose-6-phosphate isomerase [Desulfobacterales bacterium] diamond 1851 127 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
11800539 11800539 PRJNA1195374_P_NODE_6230_length_852_cov_5.028241_g5947_i0 PRJNA1195374 6230 852 5.028241 42.84061332 Pseudodesulfovibrio piezophilus 879567 Bacteria Bacteria 69.4 8.52e-7   NTclustered gi|451894361|emb|FO203427.1| 1322246 g5947 i0 78.992 3.25469483568075 119 11 13 10 650 758 2361904 2362018 Desulfovibrio piezophilus C1TLV30 complete genome blastn 2773 69.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio piezophilus
12521218 12521218 PRJNA1195374_P_NODE_18990_length_520_cov_1.702461_g18647_i0 PRJNA1195374 18990 520 1.702461 8.8527972 Bacteria 2 Bacteria Bacteria 320 7.069999999999999e-104   NR OPY91865.1 1811718 g18647 i0 84.9 10.9269230769231 172 26 99.2 0 4 519 174 345 OPY91865.1 MAG: Phosphoenolpyruvate carboxykinase (GTP) [Syntrophaceae bacterium PtaU1.Bin231] diamond 5682 320 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium PtaU1.Bin231
18173788 18173788 PRJNA1195374_P_NODE_69015_length_255_cov_2.664835_g68671_i0 PRJNA1195374 69015 255 2.664835 6.79532925 Pseudomonadati 3379134 Bacteria Bacteria 134 6.46e-36   NR WP_018124155.1 63560 g68671 i0 70.2 18.8470588235294 84 25 98.8 0 252 1 172 255 WP_018124155.1 NAD-dependent epimerase [Desulfovibrio oxyclinae] diamond 4806 135 0.992592592592593 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio oxyclinae
23274162 23274162 PRJNA1195374_P_NODE_59779_length_280_cov_1.647343_g59435_i0 PRJNA1195374 59779 280 1.647343 4.6125604 Desulfonema magnum 45655 Bacteria Bacteria 73.1 1.98e-8   NTclustered gi|2007135636|gb|CP061800.1| 45655 g59435 i0 95.556 30.0642857142857 45 2 16 0 101 145 7206149 7206105 Desulfonema magnum strain 4be13 chromosome, complete genome blastn 8418 73.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfonema Desulfonema magnum
26819443 26819443 PRJNA1195374_P_NODE_65221_length_266_cov_1.186528_g64877_i0 PRJNA1195374 65221 266 1.186528 3.15616448 Desulfovermiculus sp. 2821143 Bacteria Bacteria 87 1.24e-17   NR MFO7804023.1 2821143 g64877 i0 63.8 1.57894736842105 69 21 77.8 1 2 208 280 344 MFO7804023.1 AMP-binding protein [Desulfovermiculus sp.] diamond 420 87 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae Desulfovermiculus Desulfovermiculus sp.
26945781 26945781 PRJNA1195374_P_NODE_9522_length_714_cov_1.828393_g9210_i0 PRJNA1195374 9522 714 1.828393 13.05472602 Desulfovibrio sp. 885 Bacteria Bacteria 58.2 7.36e-6   NR MBR3664143.1 885 g9210 i0 32.9 0.331932773109244 79 53 33.2 0 616 380 157 235 MBR3664143.1 BMP family ABC transporter substrate-binding protein [Desulfovibrio sp.] diamond 237 58.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
27122700 27122700 PRJNA1195374_P_NODE_13762_length_606_cov_1.923077_g13424_i0 PRJNA1195374 13762 606 1.923077 11.65384662 Desulfovermiculus 339721 Bacteria Bacteria 247 3.37e-77   NR WP_027371616.1 339722 g13424 i0 72.8 6.03960396039604 173 41 85.6 2 519 1 3 169 WP_027371616.1 adenosylhomocysteinase [Desulfovermiculus halophilus] diamond 3660 248 0.995967741935484 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae Desulfovermiculus Desulfovermiculus halophilus
27262205 27262205 PRJNA1195374_P_NODE_84143_length_241_cov_2.535714_g83799_i0 PRJNA1195374 84143 241 2.535714 6.11107074 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 94.7 7.48e-23   NR GJM17744.1 2202153 g83799 i0 69.8 1.51867219917012 63 19 78.4 0 237 49 65 127 GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium] diamond 366 94.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27325268 27325268 PRJNA1195374_P_NODE_11923_length_647_cov_3.031359_g11591_i0 PRJNA1195374 11923 647 3.031359 19.61289273 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 299 1.06e-99   NR MCK5100564.1 2049433 g11591 i0 71.2 17.7125193199382 212 60 98.3 1 11 646 41 251 MCK5100564.1 adenosylhomocysteinase [Desulfobacteraceae bacterium] diamond 11460 299 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27325298 27325298 PRJNA1195374_P_NODE_35743_length_376_cov_1.541254_g35399_i0 PRJNA1195374 35743 376 1.541254 5.79511504 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 45.1 0.0163   NR MDY0213064.1 2099677 g35399 i0 27.6 1.01329787234043 127 80 98.9 4 1 372 45 162 MDY0213064.1 hypothetical protein [Desulfuromonadaceae bacterium] diamond 381 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium
28209255 28209255 PRJNA1195374_P_NODE_65746_length_264_cov_1.612565_g65402_i0 PRJNA1195374 65746 264 1.612565 4.2571716 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 74.7 1.28e-14   NR MDH3349824.1 2053307 g65402 i0 43.2 0.920454545454545 81 46 92 0 244 2 51 131 MDH3349824.1 Hsp20/alpha crystallin family protein [Desulfobulbaceae bacterium] diamond 243 74.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
28714700 28714700 PRJNA1195374_P_NODE_78567_length_246_cov_0.890173_g78223_i0 PRJNA1195374 78567 246 0.890173 2.18982558 Geotalea uraniireducens 351604 Bacteria Bacteria 68.9 2.14e-11   NR WP_282003038.1 351604 g78223 i0 46.6 0.890243902439024 73 36 85.4 1 225 16 192 264 WP_282003038.1 hypothetical protein [Geotalea uraniireducens] diamond 219 68.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea uraniireducens
28777639 28777639 PRJNA1195374_P_NODE_56787_length_288_cov_1.311628_g56443_i0 PRJNA1195374 56787 288 1.311628 3.77748864 Desulfobacterales bacterium 2044940 Bacteria Bacteria 54.7 3.39e-6   NR MBN1932557.1 2044940 g56443 i0 43.8 2.19791666666667 64 35 66.7 1 288 97 213 275 MBN1932557.1 oxaloacetate decarboxylase [Desulfobacterales bacterium] diamond 633 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28872389 28872389 PRJNA1195374_P_NODE_40128_length_352_cov_1.942652_g39784_i0 PRJNA1195374 40128 352 1.942652 6.83813504 Geoanaerobacter pelophilus 60036 Bacteria Bacteria 45.4 0.0143   NR WP_214170695.1 60036 g39784 i0 39.1 0.588068181818182 69 33 58 3 321 118 410 470 WP_214170695.1 glycoside hydrolase family 57 [Geoanaerobacter pelophilus] diamond 207 45.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geoanaerobacter Geoanaerobacter pelophilus
28967349 28967349 PRJNA1195374_P_NODE_58388_length_284_cov_1.127962_g58044_i0 PRJNA1195374 58388 284 1.127962 3.20341208 Dethiosulfatarculus sandiegensis 1429043 Bacteria Bacteria 42.7 0.0499   NR WP_197281916.1 1429043 g58044 i0 30.6 0.76056338028169 72 45 72.9 2 240 34 44 113 WP_197281916.1 LolA family protein [Dethiosulfatarculus sandiegensis] diamond 216 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfarculia Desulfarculales Desulfarculaceae Dethiosulfatarculus Dethiosulfatarculus sandiegensis
29554322 29554322 PRJNA1195374_P_NODE_22070_length_483_cov_1.921951_g21726_i0 PRJNA1195374 22070 483 1.921951 9.28302333 Thermodesulfobacteriota 200940 Bacteria Bacteria 93.2 1.38e-19   NR NTV14656.1 2053307 g21726 i0 38.6 3.57142857142857 153 70 91.3 6 445 5 42 176 NTV14656.1 alpha/beta hydrolase [Desulfobulbaceae bacterium] diamond 1725 93.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
29901981 29901981 PRJNA1195374_P_NODE_28571_length_424_cov_1.558405_g28227_i0 PRJNA1195374 28571 424 1.558405 6.6076372 Pseudomonadati 3379134 Bacteria Bacteria 80.9 7.58e-17   NR MFO7665801.1 2044940 g28227 i0 49.4 7.01179245283019 77 37 54.5 1 1 231 21 95 MFO7665801.1 co-chaperone GroES [Desulfobacterales bacterium] diamond 2973 81.3 0.995079950799508 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30072344 30072344 PRJNA1195374_P_NODE_58972_length_282_cov_1.803828_g58628_i0 PRJNA1195374 58972 282 1.803828 5.08679496 Desulfobacterales bacterium 2044940 Bacteria Bacteria 78.2 1.39e-14   NR MFO8085046.1 2044940 g58628 i0 68.1 0.5 47 15 50 0 281 141 306 352 MFO8085046.1 MBL fold metallo-hydrolase [Desulfobacterales bacterium] diamond 141 78.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31241363 31241363 PRJNA1195374_P_NODE_64755_length_267_cov_1.319588_g64411_i0 PRJNA1195374 64755 267 1.319588 3.52329996 Thermodesulfatator atlanticus 501497 Bacteria Bacteria 44.7 0.0104   NR WP_022853837.1 501497 g64411 i0 34.7 0.842696629213483 75 45 79.8 2 220 8 639 713 WP_022853837.1 sensor histidine kinase [Thermodesulfatator atlanticus] diamond 225 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Thermodesulfobacteria Thermodesulfobacteriales Thermodesulfatatoraceae Thermodesulfatator Thermodesulfatator atlanticus
31355467 31355467 PRJNA1195374_P_NODE_53916_length_297_cov_1.031250_g53572_i0 PRJNA1195374 53916 297 1.03125 3.0628125 Pseudomonadati 3379134 Bacteria Bacteria 101 1.91e-22   NR WP_214170407.1 60036 g53572 i0 47.9 10.7272727272727 96 50 97 0 292 5 525 620 WP_214170407.1 5-histidylcysteine sulfoxide synthase [Geoanaerobacter pelophilus] diamond 3186 102 0.990196078431373 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geoanaerobacter Geoanaerobacter pelophilus
31558001 31558001 PRJNA1195374_P_NODE_59076_length_282_cov_1.368421_g58732_i0 PRJNA1195374 59076 282 1.368421 3.85894722 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 54.3 2.2e-7   NR MEE8449527.1 2202153 g58732 i0 56.6 2.17021276595745 53 19 55.3 2 85 240 2 51 MEE8449527.1 cold-shock protein [Thermodesulfobacteriota bacterium] diamond 612 54.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31747426 31747426 PRJNA1195374_P_NODE_24237_length_461_cov_1.804124_g23893_i0 PRJNA1195374 24237 461 1.804124 8.31701164 Alkalidesulfovibrio alkalitolerans 293256 Bacteria Bacteria 43.5 0.0234   NR WP_020887868.1 293256 g23893 i0 37.7 0.344902386117137 53 31 33.2 1 72 224 19 71 WP_020887868.1 cysteine-rich small domain-containing protein [Alkalidesulfovibrio alkalitolerans] diamond 159 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Alkalidesulfovibrio Alkalidesulfovibrio alkalitolerans
31747493 31747493 PRJNA1195374_P_NODE_80577_length_244_cov_0.900585_g80233_i0 PRJNA1195374 80577 244 0.900585 2.1974274 uncultured Desulfobulbus sp. 239745 Bacteria Bacteria 111 2.45e-27   NR WP_297957253.1 239745 g80233 i0 63.2 2.82786885245902 76 28 93.4 0 244 17 254 329 WP_297957253.1 ADP-ribosylglycohydrolase family protein [uncultured Desulfobulbus sp.] diamond 690 111 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus uncultured Desulfobulbus sp.
32032373 32032373 PRJNA1195374_P_NODE_84998_length_241_cov_0.916667_g84654_i0 PRJNA1195374 84998 241 0.916667 2.20916747 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 65.9 1.95e-10   NR MEW6268975.1 2202153 g84654 i0 48.1 2.81327800829876 77 40 95.9 0 239 9 121 197 MEW6268975.1 ABC transporter ATP-binding protein [Thermodesulfobacteriota bacterium] diamond 678 65.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32095525 32095525 PRJNA1195374_P_NODE_39178_length_357_cov_1.626761_g38834_i0 PRJNA1195374 39178 357 1.626761 5.80753677 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 108 1.64e-27   NR HHL34937.1 2053307 g38834 i0 54.3 3.49579831932773 105 48 88.2 0 316 2 1 105 HHL34937.1 50S ribosomal protein L17 [Desulfobulbaceae bacterium] diamond 1248 108 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
32159004 32159004 PRJNA1195374_P_NODE_54438_length_295_cov_1.229730_g54094_i0 PRJNA1195374 54438 295 1.22973 3.6277035 Desulforhopalus sp. 2099376 Bacteria Bacteria 43.5 0.0334   NR MFT5697677.1 2099376 g54094 i0 51 0.51864406779661 51 20 51.9 2 77 229 192 237 MFT5697677.1 hypothetical protein [Desulforhopalus sp.] diamond 153 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulforhopalus Desulforhopalus sp.
32443894 32443894 PRJNA1195374_P_NODE_38619_length_360_cov_1.857143_g38275_i0 PRJNA1195374 38619 360 1.857143 6.6857148 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 58.9 2.01e-7   NR MEJ2158139.1 2049433 g38275 i0 50 0.433333333333333 52 26 43.3 0 1 156 219 270 MEJ2158139.1 crotonase/enoyl-CoA hydratase family protein [Desulfobacteraceae bacterium] diamond 156 58.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32570468 32570468 PRJNA1195374_P_NODE_71239_length_251_cov_0.865169_g70895_i0 PRJNA1195374 71239 251 0.865169 2.17157419 Desulfuromonadales bacterium 2099678 Bacteria Bacteria 44.3 0.0113   NR HKJ28734.1 2099678 g70895 i0 45.2 1.50597609561753 42 23 50.2 0 132 7 1 42 HKJ28734.1 TatD family hydrolase [Desulfuromonadales bacterium] diamond 378 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;