RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1195374" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1195374 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20168902 20168902 PRJNA1195374_P_NODE_31436_length_403_cov_1.400000_g31092_i0 PRJNA1195374 31436 403 1.4 5.642 Pseudomonadati 3379134 Bacteria Bacteria 195 5.58e-59   NR MBP9822384.1 2053589 g31092 i0 67.7 3.98263027295285 133 43 99 0 401 3 168 300 MBP9822384.1 arginine kinase [Candidatus Paceibacterota bacterium] diamond 1605 195 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28840766 28840766 PRJNA1195374_P_NODE_20308_length_503_cov_1.739535_g19965_i0 PRJNA1195374 20308 503 1.739535 8.74986105 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87 5.44e-19   NR MDR3572201.1 2053589 g19965 i0 67.5 0.495029821073559 83 25 48.3 1 3 245 6 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 249 87 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29566977 29566977 PRJNA1195374_P_NODE_32810_length_394_cov_1.398754_g32466_i0 PRJNA1195374 32810 394 1.398754 5.51109076 Minisyncoccota bacterium 2053589 Bacteria Bacteria 64.7 4.31e-10   NR HVX90588.1 2053589 g32466 i0 39.2 0.738578680203046 97 54 70.1 3 279 4 26 122 HVX90588.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 291 64.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30135250 30135250 PRJNA1195374_P_NODE_37632_length_366_cov_0.962457_g37288_i0 PRJNA1195374 37632 366 0.962457 3.52259262 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.3 0.0395   NR HVM73681.1 2053589 g37288 i0 36.6 0.581967213114754 71 40 54.9 2 35 235 355 424 HVM73681.1 YifB family Mg chelatase-like AAA ATPase [Candidatus Paceibacterota bacterium] diamond 213 44.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31241324 31241324 PRJNA1195374_P_NODE_29875_length_414_cov_1.633431_g29531_i0 PRJNA1195374 29875 414 1.633431 6.76240434 Minisyncoccota bacterium 2053589 Bacteria Bacteria 164 2.02e-45   NR MDR3558125.1 2053589 g29531 i0 60 0.978260869565217 135 54 97.8 0 6 410 237 371 MDR3558125.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 405 164 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31652484 31652484 PRJNA1195374_P_NODE_61057_length_277_cov_1.132353_g60713_i0 PRJNA1195374 61057 277 1.132353 3.13661781 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.1 0.00212   NR MDR3570671.1 2053589 g60713 i0 41 0.844765342960289 78 38 76.9 2 5 217 26 102 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 234 45.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31810818 31810818 PRJNA1195374_P_NODE_24057_length_463_cov_1.356410_g23713_i0 PRJNA1195374 24057 463 1.35641 6.2801783 Minisyncoccota bacterium 2053589 Bacteria Bacteria 195 2.07e-58   NR MEX0595889.1 2053589 g23713 i0 60.4 0.997840172786177 154 60 99.8 1 2 463 186 338 MEX0595889.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Paceibacterota bacterium] diamond 462 195 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;