RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA1195374" and tax_phylum = "Fornicata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA1195374 · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
322444 322444 PRJNA1195374_P_NODE_84501_length_241_cov_0.976190_g84157_i0 PRJNA1195374 84501 241 0.97619 2.3526179 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 113 8.26e-30   NR KAG9394003.1 201153 g84157 i0 79.2 2.78838174273859 72 15 89.6 0 8 223 85 156 KAG9394003.1 ISC system FeS cluster assembly, IscU scaffold [Carpediemonas membranifera] diamond 672 113 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
21997787 21997787 PRJNA1195374_P_NODE_14538_length_591_cov_2.254826_g14199_i0 PRJNA1195374 14538 591 2.254826 13.32602166 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 331 6.7e-86   NTclustered gi|339759377|dbj|AB600301.1| 926446 g14199 i0 80.543 71.3011844331641 442 77 74 8 4 440 842 1279 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 42139 331 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
26882762 26882762 PRJNA1195374_P_NODE_72781_length_250_cov_0.870056_g72437_i0 PRJNA1195374 72781 250 0.870056 2.17514 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 70.1 5.51e-12   NR KAG9390653.1 201153 g72437 i0 48.1 0.972 81 39 97.2 2 249 7 176 253 KAG9390653.1 Papain family cysteine protease [Carpediemonas membranifera] diamond 243 70.1 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
27167089 27167089 PRJNA1195374_P_NODE_77802_length_246_cov_0.890173_g77458_i0 PRJNA1195374 77802 246 0.890173 2.18982558 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 77.8 6.25e-16   NR KAG9396224.1 201153 g77458 i0 47.4 0.926829268292683 76 37 89 2 245 27 73 148 KAG9396224.1 Glia maturation factor beta [Carpediemonas membranifera] diamond 228 77.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28240757 28240757 PRJNA1195374_P_NODE_21846_length_485_cov_92.439320_g21503_i0 PRJNA1195374 21846 485 92.43932 448.330702 Giardia intestinalis assemblage B 1394984 Fornicata other_Eukaryota 47.8 0.00753   NR KWX13038.1 1394984 g21503 i0 37 0.451546391752577 73 42 42.7 2 116 322 103 175 KWX13038.1 Variant-specific surface protein [Giardia intestinalis assemblage B] diamond 219 47.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28462200 28462200 PRJNA1195374_P_NODE_14486_length_592_cov_2.175337_g14148_i0 PRJNA1195374 14486 592 2.175337 12.87799504 Hexamita inflata 28002 Fornicata other_Eukaryota 85.5 3.01e-17   NR CAK8791145.1 28002 g14148 i0 36.6 1.97635135135135 131 69 66.4 4 563 171 33 149 CAK8791145.1 HINF_096380 [Hexamita inflata] diamond 1170 85.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28859761 28859761 PRJNA1195374_P_NODE_5128_length_921_cov_4.116745_g4865_i0 PRJNA1195374 5128 921 4.116745 37.91522145 Viridiplantae 33090 Fornicata other_Eukaryota 61.2 2.43e-6   NR XP_001709457.2 5741 g4865 i0 31.2 1.56351791530945 231 147 72 6 54 716 83 311 XP_001709457.2 VSP [Giardia intestinalis] diamond 1440 61.6 0.993506493506494 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29566973 29566973 PRJNA1195374_P_NODE_3110_length_1108_cov_2.052174_g2897_i0 PRJNA1195374 3110 1108 2.052174 22.73808792 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 117 8.02e-26   NR KAG9390019.1 201153 g2897 i0 27.1 0.798736462093863 295 209 78.8 4 1046 174 4 296 KAG9390019.1 MAC/Perforin domain [Carpediemonas membranifera] diamond 885 117 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29661376 29661376 PRJNA1195374_P_NODE_38170_length_363_cov_1.058621_g37826_i0 PRJNA1195374 38170 363 1.058621 3.84279423 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 52.8 1.52e-5   NR KAG9397170.1 201153 g37826 i0 54.8 0.347107438016529 42 17 33.9 2 363 241 132 172 KAG9397170.1 phage late control gene D protein GPD [Carpediemonas membranifera] diamond 126 52.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31450372 31450372 PRJNA1195374_P_NODE_56416_length_289_cov_1.370370_g56072_i0 PRJNA1195374 56416 289 1.37037 3.9603693 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.4 9.28e-24   NR CAK8817778.1 28002 g56072 i0 48.9 11.8546712802768 94 48 97.6 0 288 7 38 131 CAK8817778.1 HINF_084084 [Hexamita inflata] diamond 3426 100 0.994 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31494660 31494660 PRJNA1195374_P_NODE_45676_length_327_cov_2.590551_g45332_i0 PRJNA1195374 45676 327 2.590551 8.47110177 Giardia intestinalis ATCC 5 5741 Fornicata other_Eukaryota 48.9 4.49e-4   NR EET01524.1 598745 g45332 i0 34.2 1.55045871559633 76 49 69.7 1 275 48 135 209 EET01524.1 Translation elongation factor [Giardia intestinalis ATCC 50581] diamond 507 48.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31652480 31652480 PRJNA1195374_P_NODE_57437_length_286_cov_1.779343_g57093_i0 PRJNA1195374 57437 286 1.779343 5.08892098 Giardia muris 5742 Fornicata other_Eukaryota 70.5 1.08e-11   NR TNJ27700.1 5742 g57093 i0 42.3 1.90909090909091 97 37 81.8 2 1 234 173 269 TNJ27700.1 putative Ser/Thr phosphatase 2C [Giardia muris] diamond 546 70.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
32475433 32475433 PRJNA1195374_P_NODE_30639_length_408_cov_2.841791_g30295_i0 PRJNA1195374 30639 408 2.841791 11.59450728 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 65.9 1.88e-9   NR KAG9390253.1 201153 g30295 i0 33.6 1.66176470588235 113 70 83.1 1 3 341 373 480 KAG9390253.1 Polycystin cation channel [Carpediemonas membranifera] diamond 678 65.9 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32809453 32809453 PRJNA1195374_P_NODE_6120_length_858_cov_2.254777_g5839_i0 PRJNA1195374 6120 858 2.254777 19.34598666 Viridiplantae 33090 Fornicata other_Eukaryota 87.8 1.48e-16   NR GIQ86158.1 797122 g5839 i0 46.5 1.45104895104895 101 54 35.3 0 580 278 131 231 GIQ86158.1 hypothetical protein KIPB_007957, partial [Kipferlia bialata] diamond 1245 87.8 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;